RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ZNF334Q9HCZ1 680 aaPredicted RBP6.94□□□□□ -1.3
CD44-204ENST00000279452 UBE2TQ9NPD8 197 aaPredicted RBP6.94□□□□□ -1.3
CD44-204ENST00000279452 CD320Q9NPF0 282 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 DMAP1Q9NPF5 467 aaPredicted RBP6.94□□□□□ -1.3
CD44-204ENST00000279452 FANCLQ9NW38 375 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 UXTQ9UBK9 157 aaPredicted RBP6.94□□□□□ -1.3
CD44-204ENST00000279452 USTQ9Y2C2 406 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 COQ4Q9Y3A0 265 aa6.94□□□□□ -1.3
CD44-204ENST00000279452 C19orf67A6NJJ6 358 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 SMTNL1A8MU46 457 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 DPYSL4O14531 572 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 DCXO43602 365 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 LAMP2P13473 410 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 SLC9A1P19634 815 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 RFX1P22670 979 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 CDC25CP30307 473 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 CCR2P41597 374 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 MAGEA11P43364 429 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 ZNF165P49910 485 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 CACNA2D1P54289 1103 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 MFAP3P55082 362 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 APBA1Q02410 837 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 RAPGEF1Q13905 1077 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 KRT31Q15323 416 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 NFKBIBQ15653 356 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 PTPN21Q16825 1174 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 GOLGA7BQ2TAP0 167 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 ZSCAN23Q3MJ62 389 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 SGO2Q562F6 1265 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 STXBP5Q5T5C0 1151 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 GJB7Q6PEY0 223 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 TRIM65Q6PJ69 517 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 DENND5BQ6ZUT9 1274 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 MTSS1LQ765P7 747 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 TMC8Q8IU68 726 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 IRF2BP1Q8IU81 584 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 GPIHBP1Q8IV16 184 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 ZDHHC14Q8IZN3 488 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 FUKQ8N0W3 1084 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
CD44-204ENST00000279452 SHKBP1Q8TBC3 707 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 ZSCAN18Q8TBC5 510 aaPredicted RBP6.93□□□□□ -1.3
CD44-204ENST00000279452 RSAD2Q8WXG1 361 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 MRPS31Q92665 395 aaKnown RBP6.93□□□□□ -1.3
CD44-204ENST00000279452 KAT5Q92993 513 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 KCNK16Q96T55 309 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 LSM14BQ9BX40 385 aaKnown RBP6.93□□□□□ -1.3
CD44-204ENST00000279452 KCNK12Q9HB15 430 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 EHD2Q9NZN4 543 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 HESX1Q9UBX0 185 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 APEX2Q9UBZ4 518 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 FBXL21Q9UKT6 434 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 SORCS3Q9UPU3 1222 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 NUMBLQ9Y6R0 609 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 SCN1AP35498 2009 aa6.93□□□□□ -1.3
CD44-204ENST00000279452 GOLGA6L19H0YKK7 550 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 M0QYV0 167 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 PMM2O15305 246 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 NOL4O94818 638 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 CKMP06732 381 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 CFHP08603 1231 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 ALADP13716 330 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
CD44-204ENST00000279452 PON1P27169 355 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 YWHAQP27348 245 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 AVPR1AP37288 418 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 COPB1P53618 953 aaKnown RBP6.92□□□□□ -1.3
CD44-204ENST00000279452 SLC5A3P53794 718 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 RAD23BP54727 409 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 EPHA5P54756 1037 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 GCNT1Q02742 428 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 GRM2Q14416 872 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 FAM78AQ5JUQ0 283 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 PRSS36Q5K4E3 855 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 PPP1R26Q5T8A7 1209 aaPredicted RBP6.92□□□□□ -1.3
CD44-204ENST00000279452 CDKAL1Q5VV42 579 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 PARM1Q6UWI2 310 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 ENOSF1Q7L5Y1 443 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 YAF2Q8IY57 180 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 CRYBG2Q8N1P7 616 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 MAB21L3Q8N8X9 362 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 SLC4A11Q8NBS3 891 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 WHAMMQ8TF30 809 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 FBXO32Q969P5 355 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 FAXDC2Q96IV6 333 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 C8orf48Q96LL4 319 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 FAM81BQ96LP2 452 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 SLITRK1Q96PX8 696 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 NACA2Q9H009 215 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 SMOC2Q9H3U7 446 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 ZFP14Q9HCL3 533 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 GDE1Q9NZC3 331 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 TRPM5Q9NZQ8 1165 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 IGSF9Q9P2J2 1179 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 EPS15L1Q9UBC2 864 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 TSPAN16Q9UKR8 245 aa6.92□□□□□ -1.3
CD44-204ENST00000279452 ZFP37Q9Y6Q3 630 aaPredicted RBP6.92□□□□□ -1.3
CD44-204ENST00000279452 MYO9BQ13459 2157 aa6.91□□□□□ -1.3
CD44-204ENST00000279452 TRAV19A0A0A6YYK7 116 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms