RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 LSM8O95777 96 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 PTPN1P18031 435 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 DEFB103AP81534 67 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 GRIK3Q13003 919 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CDO1Q16878 200 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 OR6B2Q6IFH4 312 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 TAS1R1Q7RTX1 841 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 HACE1Q8IYU2 909 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CRIPAKQ8N1N5 446 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 FEZF2Q8TBJ5 459 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 SLC35F5Q8WV83 523 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 ARMC5Q96C12 935 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 PCED1BQ96HM7 432 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CASD1Q96PB1 797 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 LHX5Q9H2C1 402 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 NRDE2Q9H7Z3 1164 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 DMGDHQ9UI17 866 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 EFCAB8A8MWE9 144 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 MYO1FO00160 1098 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CAND2O75155 1236 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 SEC31AO94979 1220 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 TCP1P17987 556 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 IL1R2P27930 398 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 PNPLA4P41247 253 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 HADHBP55084 474 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 GABPB1Q06547 395 aaPredicted RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 DSC1Q08554 894 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 FAM102AQ5T9C2 384 aaPredicted RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CCDC181Q5TID7 509 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 C11orf63Q6NUN7 778 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 DCUN1D2Q6PH85 259 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 RSPH1Q8WYR4 309 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 PGBD4Q96DM1 585 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 RNPC3Q96LT9 517 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CFAP57Q96MR6 1250 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 GDAP1L1Q96MZ0 367 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 HEMGNQ9BXL5 484 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 GPR62Q9BZJ7 368 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 DDX47Q9H0S4 455 aaKnown RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 AVENQ9NQS1 362 aaPredicted RBP12.36□□□□□ -0.43
SSRP1-201ENST00000278412 CALCOCO1Q9P1Z2 691 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 UVRAGQ9P2Y5 699 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 TBKBP1A7MCY6 615 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 MED7O43513 233 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 CSPG5O95196 566 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
SSRP1-201ENST00000278412 MAP3K7CLP57077 242 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SDHAF4Q5VUM1 108 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 CRYBG2Q8N1P7 616 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 ZMIZ2Q8NF64 920 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PARD6BQ9BYG5 372 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
SSRP1-201ENST00000278412 KRT82Q9NSB4 513 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PARVAQ9NVD7 372 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PCSK1NQ9UHG2 260 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SOAT2O75908 522 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PROSCO94903 275 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 MYBL2P10244 700 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 KRT3P12035 628 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.432e-9■□□□□ 9.9
SSRP1-201ENST00000278412 ATP11AP98196 1134 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
SSRP1-201ENST00000278412 HFE2Q6ZVN8 426 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 ZNF771Q7L3S4 317 aaPredicted RBP12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SEPT8Q92599 483 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PGLYRP2Q96PD5 576 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 KRT12Q99456 494 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 CEP83Q9Y592 693 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 PCDHB7Q9Y5E2 793 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SQORQ9Y6N5 450 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 ATP8B3O60423 1300 aa12.35□□□□□ -0.43
SSRP1-201ENST00000278412 SPDYE4A6NLX3 237 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 SLC11A1P49279 550 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 PGFP49763 221 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 VSNL1P62760 191 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 RSPO2Q6UXX9 243 aaPredicted RBP12.34□□□□□ -0.43
SSRP1-201ENST00000278412 CLEC20AQ6ZU45 233 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 GPR152Q8TDT2 470 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
SSRP1-201ENST00000278412 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 SELENOOQ9BVL4 669 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 TMPRSS4Q9NRS4 437 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 TMEM161AQ9NX61 479 aa12.34□□□□□ -0.43
SSRP1-201ENST00000278412 FNDC1Q4ZHG4 1894 aaPredicted RBP12.34□□□□□ -0.43
SSRP1-201ENST00000278412 RPLP2P05387 115 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms