RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 POLNQ7Z5Q5 900 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 TRABD2AQ86V40 505 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 WDR49Q8IV35 697 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 TMEM35BQ8NCS4 154 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ARRDC4Q8NCT1 418 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 C9orf72Q96LT7 481 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ECT2Q9H8V3 914 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 SSU72Q9NP77 194 aaKnown RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ARHGEF3Q9NR81 526 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 AGAP1Q9UPQ3 857 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 COLQQ9Y215 455 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 NUB1Q9Y5A7 615 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 SMAPO00193 183 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 DUSP11O75319 330 aaKnown RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ASMTLO95671 621 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CCNB1P14635 433 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CD58P19256 250 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 TAC1P20366 129 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 WNT7BP56706 349 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 TFDP3Q5H9I0 405 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 SPDYAQ5MJ70 313 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 LLGL2Q6P1M3 1020 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 TBC1D1Q86TI0 1168 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 KLHDC9Q8NEP7 349 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 KLHL29Q96CT2 875 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 PITPNM3Q9BZ71 974 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 HAPLN2Q9GZV7 340 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 PCDH9Q9HC56 1237 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 ZNF148Q9UQR1 794 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 USTQ9Y2C2 406 aa13.58□□□□□ -0.24
C9orf3-201ENST00000277198 CFHP08603 1231 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 EDNRBP24530 442 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 ARSEP51690 589 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 EFNA5P52803 228 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 VCPP55072 806 aaKnown RBP13.57□□□□□ -0.24
C9orf3-201ENST00000277198 TNFAIP2Q03169 654 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 SPARCL1Q14515 664 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 OASLQ15646 514 aaKnown RBP13.57□□□□□ -0.24
C9orf3-201ENST00000277198 KCNA10Q16322 511 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 CENPUQ71F23 418 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 ASRGL1Q7L266 308 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 PHLDB2Q86SQ0 1253 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 BRSK2Q8IWQ3 736 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 FITM2Q8N6M3 262 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 DENND1AQ8TEH3 1009 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 TCP11Q8WWU5 503 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 SAYSD1Q9NPB0 183 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 DNAJC17Q9NVM6 304 aaKnown RBP13.57□□□□□ -0.24
C9orf3-201ENST00000277198 TBK1Q9UHD2 729 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 BAIAP2L1Q9UHR4 511 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 DNPEPQ9ULA0 475 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 STRIP2Q9ULQ0 834 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
C9orf3-201ENST00000277198 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
C9orf3-201ENST00000277198 hCG_1818297A0A087WSY0 165 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 A0A1W2PQ45 241 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 A0A1W2PQY0 241 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 LRRIQ4A6NIV6 560 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 GH1P01241 217 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 KRT1P04264 644 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 ATP4AP20648 1035 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 STXBP2Q15833 593 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 TRIM60Q495X7 471 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 DNAJC24Q6P3W2 148 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 MFSD7Q6UXD7 560 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 RNF180Q86T96 592 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 GDAP1Q8TB36 358 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 FBF1Q8TES7 1133 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 COPS5Q92905 334 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 PWWP2AQ96N64 755 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 TARS2Q9BW92 718 aaKnown RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 EBF2Q9HAK2 575 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 NRBP2Q9NSY0 501 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 PHF24Q9UPV7 400 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 ATP11BQ9Y2G3 1177 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 ARIH2O95376 493 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 GCAP28676 217 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 ACLYP53396 1101 aa13.56□□□□□ -0.24
C9orf3-201ENST00000277198 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 WDR4P57081 412 aaKnown RBP13.56□□□□□ -0.24
C9orf3-201ENST00000277198 RPL7AP62424 266 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms