RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 NOL4O94818 638 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 TRIM49P0CI25 452 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 TRIM49CP0CI26 452 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 CSH1P0DML2 217 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 CSH2P0DML3 217 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 BDNFP23560 247 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 PRCPP42785 496 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 MAGEA11P43364 429 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 VAMP7P51809 220 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 CACNA2D1P54289 1103 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 ADAM9Q13443 819 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 ARHGAP15Q53QZ3 475 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 SPOPLQ6IQ16 392 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 TXNDC11Q6PKC3 985 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 SCARA5Q6ZMJ2 495 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 TTC8Q8TAM2 541 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 NKD2Q969F2 451 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-201ENST00000275036 EEF2KMTQ96G04 330 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 MYRFLQ96LU7 910 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 TIGD1Q96MW7 591 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 TMEM30AQ9NV96 361 aa15.4■□□□□ 0.06
HMGN3-201ENST00000275036 SPATA6Q9NWH7 488 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-201ENST00000275036 MAGEC2Q9UBF1 373 aaPredicted RBP15.4■□□□□ 0.06
HMGN3-201ENST00000275036 RIF1Q5UIP0 2472 aaKnown RBP15.39■□□□□ 0.05
HMGN3-201ENST00000275036 IKBKBO14920 756 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 HLA-DRAP01903 254 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 PTPN1P18031 435 aaKnown RBP15.39■□□□□ 0.05
HMGN3-201ENST00000275036 CCNE1P24864 410 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 RPS9P46781 194 aaKnown RBP15.39■□□□□ 0.05
HMGN3-201ENST00000275036 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
HMGN3-201ENST00000275036 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 TNK2Q07912 1038 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 ZNF667Q5HYK9 610 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
HMGN3-201ENST00000275036 TXNDC8Q6A555 127 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 TSSK4Q6SA08 328 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 MAB21L3Q8N8X9 362 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 FAM3CQ92520 227 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 E2F7Q96AV8 911 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
HMGN3-201ENST00000275036 CCDC34Q96HJ3 373 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 GSDMAQ96QA5 445 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 GCNAQ96QF7 691 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 OBP2AQ9NY56 170 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 GTSE1Q9NYZ3 720 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 GVINP1Q7Z2Y8 2422 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 ATG2BQ96BY7 2078 aa15.39■□□□□ 0.05
HMGN3-201ENST00000275036 A8MXQ7 604 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 CLDN5O00501 218 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 ASS1P00966 412 aaKnown RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 PSMC2P35998 433 aaKnown RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 GCLMP48507 274 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 PMS1P54277 932 aaKnown RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 USP46P62068 366 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 MTAPQ13126 283 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 GAS6Q14393 721 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 MAPRE1Q15691 268 aaKnown RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 EDRF1Q3B7T1 1238 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 INTS8Q75QN2 995 aaKnown RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 YAF2Q8IY57 180 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 CMTM8Q8IZV2 173 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 B3GALNT2Q8NCR0 500 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 BPIFB1Q8TDL5 484 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 USP13Q92995 863 aaPredicted RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 SMARCE1Q969G3 411 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 CHFRQ96EP1 664 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 SLC22A12Q96S37 553 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 NELL2Q99435 816 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 B3GNT5Q9BYG0 378 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 PRMT8Q9NR22 394 aaPredicted RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 RMND1Q9NWS8 449 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 HMGXB4Q9UGU5 601 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
HMGN3-201ENST00000275036 FAM186AA6NE01 2351 aa15.38■□□□□ 0.05
HMGN3-201ENST00000275036 OTOL1A6NHN0 477 aaPredicted RBP15.37■□□□□ 0.05
HMGN3-201ENST00000275036 F8VP50 259 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 MAN2B1O00754 1011 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 LAMTOR5O43504 91 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 CHRNB1P11230 501 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 TDGF1P13385 188 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 RPL13P26373 211 aaKnown RBP15.37■□□□□ 0.05
HMGN3-201ENST00000275036 GRIK1P39086 918 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 PIK3CAP42336 1068 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 MAGEA9P43362 315 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 ASPAP45381 313 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 PAQR9Q6ZVX9 377 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 TAS1R2Q8TE23 839 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 SPATA17Q96L03 361 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 CHRDQ9H2X0 955 aa15.37■□□□□ 0.05
HMGN3-201ENST00000275036 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms