RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 B3GALNT2Q8NCR0 500 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 SLC2A14Q8TDB8 520 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
CAPN9-201ENST00000271971 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
CAPN9-201ENST00000271971 KIAA1257Q9ULG3 409 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 SCINQ9Y6U3 715 aa13.21□□□□□ -0.29
CAPN9-201ENST00000271971 TARSL2A2RTX5 802 aaKnown RBP13.21□□□□□ -0.3
CAPN9-201ENST00000271971 INPPL1O15357 1258 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 CEP104O60308 925 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 ZNF211Q13398 564 aaPredicted RBP13.21□□□□□ -0.3
CAPN9-201ENST00000271971 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 DNAJC21Q5F1R6 531 aaKnown RBP13.21□□□□□ -0.3
CAPN9-201ENST00000271971 AADACL2Q6P093 401 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 XYLT1Q86Y38 959 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.3
CAPN9-201ENST00000271971 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM161AQ9NX61 479 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 TBX21Q9UL17 535 aa13.21□□□□□ -0.3
CAPN9-201ENST00000271971 VWA8A3KMH1 1905 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-201ENST00000271971 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 E5RJQ4 531 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 MYO1FO00160 1098 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 CLDN5O00501 218 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 SHOX2O60902 331 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-201ENST00000271971 OGDHQ02218 1023 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 PKDCCQ504Y2 493 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 PMF1Q6P1K2 205 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 CRYBG2Q8N1P7 616 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 FEZF2Q8TBJ5 459 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 CD101Q93033 1021 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 C18orf8Q96DM3 657 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 RPGRIP1Q96KN7 1286 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 FAM204AQ9H8W3 233 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 GABRDO14764 452 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 RNASELQ05823 741 aaKnown RBP13.2□□□□□ -0.3
CAPN9-201ENST00000271971 STILQ15468 1287 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 MDH1BQ5I0G3 518 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 DCUN1D2Q6PH85 259 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 JOSD2Q8TAC2 188 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 URGCPQ8TCY9 931 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 CALR3Q96L12 384 aaKnown RBP13.2□□□□□ -0.3
CAPN9-201ENST00000271971 METTL5Q9NRN9 209 aaKnown RBP13.2□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 HESX1Q9UBX0 185 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 USTQ9Y2C2 406 aa13.2□□□□□ -0.3
CAPN9-201ENST00000271971 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-201ENST00000271971 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
CAPN9-201ENST00000271971 RHOXF2BP0C7M4 288 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 MRPS25P82663 173 aaKnown RBP13.19□□□□□ -0.3
CAPN9-201ENST00000271971 DSC1Q08554 894 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 CFAP221Q4G0U5 840 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 EMC1Q8N766 993 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
CAPN9-201ENST00000271971 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 SELENOOQ9BVL4 669 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 CRTAC1Q9NQ79 661 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 RBM12Q9NTZ6 932 aaKnown RBP13.19□□□□□ -0.3
CAPN9-201ENST00000271971 PCDHB7Q9Y5E2 793 aa13.19□□□□□ -0.3
CAPN9-201ENST00000271971 TMEM191CA6NGB0 347 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 RNF40O75150 1001 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PROSCO94903 275 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 CXCL10P02778 98 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 ODC1P11926 461 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 TCF4P15884 667 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PTPN1P18031 435 aaKnown RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 OR1G1P47890 313 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 TADA2BQ86TJ2 420 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 COLGALT2Q8IYK4 626 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 ABI1Q8IZP0 508 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 FUKQ8N0W3 1084 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 APBB2Q92870 758 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 PBKQ96KB5 322 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 RTP3Q9BQQ7 232 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 SYT15Q9BQS2 421 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 LRFN2Q9ULH4 789 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 GABBR2O75899 941 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 CLTBP09497 229 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 ITGB8P26012 769 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 CTNNA1P35221 906 aaKnown RBP13.18□□□□□ -0.3
CAPN9-201ENST00000271971 GJC1P36383 396 aa13.18□□□□□ -0.3
CAPN9-201ENST00000271971 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms