RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PYGBP11216 843 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 SP100P23497 879 aaPredicted RBP28.79■■■□□ 2.2
CBX4-201ENST00000269397 CDK16Q00536 496 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 FAAP100Q0VG06 881 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 PTK7Q13308 1070 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 ALYREFQ86V81 257 aaKnown RBP28.79■■■□□ 2.2
CBX4-201ENST00000269397 ZC3H18Q86VM9 953 aaKnown RBP28.79■■■□□ 2.2
CBX4-201ENST00000269397 SH3TC2Q8TF17 1288 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 CNTN6Q9UQ52 1028 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 WDR81Q562E7 1941 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 ITGBL1O95965 494 aaPredicted RBP28.79■■■□□ 2.2
CBX4-201ENST00000269397 DLDP09622 509 aaKnown RBP28.79■■■□□ 2.2
CBX4-201ENST00000269397 WEE2P0C1S8 567 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 PSMA2P25787 234 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 MDH1BQ5I0G3 518 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 PCGF5Q86SE9 256 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 PPP1R12CQ9BZL4 782 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 PSMG1O95456 288 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 NR3C2P08235 984 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 PIGHQ14442 188 aaPredicted RBP28.78■■■□□ 2.2
CBX4-201ENST00000269397 ARFGAP1Q8N6T3 406 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 JOSD2Q8TAC2 188 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 TEKT4Q8WW24 435 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 TFAP2BQ92481 460 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 PCSK1NQ9UHG2 260 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 RPL26L1Q9UNX3 145 aaKnown RBP28.78■■■□□ 2.2
CBX4-201ENST00000269397 K7ERI5 159 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 HNRNPCL1O60812 293 aaKnown RBP28.78■■■□□ 2.2
CBX4-201ENST00000269397 FAM155BO75949 473 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 ELK3P41970 407 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 EMC2Q15006 297 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 KBTBD12Q3ZCT8 623 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 SPDYE2Q495Y8 402 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 LRRC74BQ6ZQY2 392 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 PDIK1LQ8N165 341 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 PHC3Q8NDX5 983 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 CGRRF1Q99675 332 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 NMUR2Q9GZQ4 415 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 DDX56Q9NY93 547 aaKnown RBP28.78■■■□□ 2.2
CBX4-201ENST00000269397 WASF2Q9Y6W5 498 aa28.78■■■□□ 2.2
CBX4-201ENST00000269397 PLSCR1O15162 318 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 AVILO75366 819 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 GHRHRQ02643 423 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 THOC5Q13769 683 aaKnown RBP28.77■■■□□ 2.2
CBX4-201ENST00000269397 TAF5Q15542 800 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 CMPK2Q5EBM0 449 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 KIAA0319LQ8IZA0 1049 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 EMC1Q8N766 993 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 FBXO27Q8NI29 283 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 SEC23IPQ9Y6Y8 1000 aaKnown RBP28.77■■■□□ 2.2
CBX4-201ENST00000269397 CNTNAP2Q9UHC6 1331 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 RGS20O76081 388 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 GNAT1P11488 350 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 TNFSF9P41273 254 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 ZNF132P52740 706 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 PRKD1Q15139 912 aaPredicted RBP28.77■■■□□ 2.2
CBX4-201ENST00000269397 PDCD7Q8N8D1 485 aaKnown RBP28.77■■■□□ 2.2
CBX4-201ENST00000269397 TMEM35BQ8NCS4 154 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 MECRQ9BV79 373 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 TTLL13PA6NNM8 815 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 FCHO1O14526 889 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 PSAPP07602 524 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 KCNA2P16389 499 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 MYL6P60660 151 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 PPP1R15BQ5SWA1 713 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 CCDC62Q6P9F0 684 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 VSIG10LQ86VR7 867 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 STMN2Q93045 179 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 IMPG2Q9BZV3 1241 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.77■■■□□ 2.23e-7■□□□□ 11
CBX4-201ENST00000269397 IKBKGQ9Y6K9 419 aa28.77■■■□□ 2.2
CBX4-201ENST00000269397 WDR46O15213 610 aaKnown RBP28.76■■■□□ 2.19
CBX4-201ENST00000269397 AMPD1P23109 780 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 ETV4P43268 484 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 SLC34A1Q06495 639 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 ENPEPQ07075 957 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 RSBN1LQ6PCB5 846 aaPredicted RBP28.76■■■□□ 2.19
CBX4-201ENST00000269397 DEPTORQ8TB45 409 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 SLC9A2Q9UBY0 812 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 MTO1Q9Y2Z2 717 aaKnown RBP28.76■■■□□ 2.19
CBX4-201ENST00000269397 TCRBV9S1A1TA0A576 114 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 LRCH4O75427 683 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 PTPN7P35236 360 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 ACTR2P61160 394 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 YWHAGP61981 247 aaKnown RBP eCLIP28.76■■■□□ 2.19
CBX4-201ENST00000269397 CIAPIN1Q6FI81 312 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 CDHR3Q6ZTQ4 885 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 OXNAD1Q96HP4 312 aaPredicted RBP28.76■■■□□ 2.19
CBX4-201ENST00000269397 CYTH2Q99418 400 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 MTMR12Q9C0I1 747 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 ZNF395Q9H8N7 513 aaPredicted RBP28.76■■■□□ 2.19
CBX4-201ENST00000269397 JPH1Q9HDC5 661 aaPredicted RBP28.76■■■□□ 2.19
CBX4-201ENST00000269397 CISHQ9NSE2 258 aa28.76■■■□□ 2.19
CBX4-201ENST00000269397 KBTBD13C9JR72 458 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 KIF3CO14782 793 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 HIRAP54198 1017 aaPredicted RBP28.75■■■□□ 2.19
CBX4-201ENST00000269397 ALKBH8Q96BT7 664 aaKnown RBP28.75■■■□□ 2.19
CBX4-201ENST00000269397 FETUBQ9UGM5 382 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 STYXL1Q9Y6J8 313 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 STAM2O75886 525 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms