RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CCNI2Q6ZMN8 369 aaPredicted RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 ETNPPLQ8TBG4 499 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 TFB1MQ8WVM0 346 aaKnown RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 CNPY3Q9BT09 278 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 TRABDQ9H4I3 376 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 F5H5T6 163 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 PEX10O60683 326 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 PMPCBO75439 489 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 ESRRBO95718 433 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 MAP2K2P36507 400 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 PTGER2P43116 358 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 LONRF1Q17RB8 773 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 PGLYRP2Q96PD5 576 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 TUBB6Q9BUF5 446 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 DRC3Q9H069 523 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 AP5Z1O43299 807 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 MSCO60682 206 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 CABYRO75952 493 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 EIF4BP23588 611 aaKnown RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 HADHAP40939 763 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 CARSP49589 748 aaKnown RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 TRMT10CQ7L0Y3 403 aaKnown RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 RMDN2Q96LZ7 410 aa14.3□□□□□ -0.12
NPC1-201ENST00000269228 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
NPC1-201ENST00000269228 GNGT2O14610 69 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 DIAPH2O60879 1101 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 FLT3LGP49771 235 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 AGR3Q8TD06 166 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 ARHGEF38Q9NXL2 777 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 CDY2AQ9Y6F7 541 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 NDUFS3O75489 264 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 SNHG28P0DPA3 235 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 ITGB3BPQ13352 177 aaPredicted RBP14.29□□□□□ -0.12
NPC1-201ENST00000269228 CBWD6Q4V339 395 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 CBWD3Q5JTY5 395 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 CBWD5Q5RIA9 395 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 SNX19Q92543 992 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 TMEM134Q9H6X4 195 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 HES2Q9Y543 173 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 TMEM88BA6NKF7 163 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 FKTNO75072 461 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 MAFO75444 373 aaPredicted RBP14.29□□□□□ -0.12
NPC1-201ENST00000269228 EPHB3P54753 998 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 GCNT1Q02742 428 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.29□□□□□ -0.126e-6■■■■■ 28.1
NPC1-201ENST00000269228 EDEM1Q92611 657 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 C20orf96Q9NUD7 363 aaPredicted RBP14.29□□□□□ -0.12
NPC1-201ENST00000269228 AIPL1Q9NZN9 384 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 SMIM24O75264 130 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 SETSIPP0DME0 302 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 MAGEA4P43358 317 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 MDM2Q00987 491 aaPredicted RBP14.29□□□□□ -0.12
NPC1-201ENST00000269228 TRIM68Q6AZZ1 485 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 RUBCNQ92622 972 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 DNAJC19Q96DA6 116 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 HSD17B14Q9BPX1 270 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
NPC1-201ENST00000269228 NFKBIEO00221 500 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 WNT7AO00755 349 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 PROSCO94903 275 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 CLNS1AP54105 237 aaKnown RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 UGCGQ16739 394 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 C3orf62Q6ZUJ4 267 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 CINPQ9BW66 212 aaPredicted RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 GPR63Q9BZJ6 419 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 USP18Q9UMW8 372 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 PCDHB5Q9Y5E4 795 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 A0A1B0GUA9 196 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 TLR2O60603 784 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 DCTN3O75935 186 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 GFAPP14136 432 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 USP10Q14694 798 aaKnown RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 UGP2Q16851 508 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 LBX2Q6XYB7 198 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 CHD2O14647 1828 aaKnown RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 ROBO3Q96MS0 1386 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 ZNF263O14978 683 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 CDH16O75309 829 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 CAPSQ13938 189 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 MTMR14Q8NCE2 650 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 TMEM161BQ8NDZ6 487 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 OR2W6PQ8NHA6 318 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 N4BP2L2Q92802 583 aaPredicted RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 SLIT2O94813 1529 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 SPATA31C1P0DKV0 1188 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 STIP1P31948 543 aaKnown RBP14.28□□□□□ -0.12
NPC1-201ENST00000269228 SCNN1GP51170 649 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 DLG4P78352 724 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 FAM110CQ1W6H9 321 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 TFDP3Q5H9I0 405 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 SZRD1Q7Z422 152 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 SLC51AQ86UW1 340 aa14.28□□□□□ -0.12
NPC1-201ENST00000269228 MYCBPQ99417 103 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms