RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
COPS3-201ENST00000268717 SNX25Q9H3E2 840 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 SLITRK6Q9H5Y7 841 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 GOLGA2P5Q9HBQ8 144 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 CYLDQ9NQC7 956 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 RGS18Q9NS28 235 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
COPS3-201ENST00000268717 GOLGA6L10A0A0M3HER8 536 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 MEIS3P2A8K0S8 358 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 KRIT1O00522 736 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 EOMESO95936 686 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 FGGP02679 453 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 GNL1P36915 607 aaPredicted RBP16.2■□□□□ 0.18
COPS3-201ENST00000268717 AARSP49588 968 aaKnown RBP eCLIP16.2■□□□□ 0.18
COPS3-201ENST00000268717 GRIK3Q13003 919 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 ORC1Q13415 861 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 PIGHQ14442 188 aaPredicted RBP16.2■□□□□ 0.18
COPS3-201ENST00000268717 PLEKHG4Q58EX7 1191 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
COPS3-201ENST00000268717 DCUN1D2Q6PH85 259 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 XYLT1Q86Y38 959 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 RHOT1Q8IXI2 618 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 ADGRF2Q8IZF7 708 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 OR6B3Q8NGW1 331 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 TIFAQ96CG3 184 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
COPS3-201ENST00000268717 CPXM1Q96SM3 734 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 SLC9A7Q96T83 725 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 TRIM7Q9C029 511 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 ARFGAP3Q9NP61 516 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 STIM2Q9P246 746 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 HESX1Q9UBX0 185 aa16.2■□□□□ 0.18
COPS3-201ENST00000268717 ABHD14A-ACY1A0A1B0GW23 586 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 PODXLO00592 558 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 GABRDO14764 452 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 WDR5P61964 334 aaKnown RBP16.19■□□□□ 0.18
COPS3-201ENST00000268717 PSMC1P62191 440 aaKnown RBP16.19■□□□□ 0.18
COPS3-201ENST00000268717 VSNL1P62760 191 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 RAB30Q15771 203 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 LONRF2Q1L5Z9 754 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 GOLGA7BQ2TAP0 167 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 MAP9Q49MG5 647 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 LLGL2Q6P1M3 1020 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 ACOT1Q86TX2 421 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 DBF4BQ8NFT6 615 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 FAM161BQ96MY7 647 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 MCEEQ96PE7 176 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 LRRC1Q9BTT6 524 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 SYNCQ9H7C4 482 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.19■□□□□ 0.18
COPS3-201ENST00000268717 MSRAQ9UJ68 235 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 NME7Q9Y5B8 376 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 CHD7Q9P2D1 2997 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 EFCAB14O75071 495 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
COPS3-201ENST00000268717 KRT3P12035 628 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 MARCKSL1P49006 195 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 SCNN1GP51170 649 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 RABGGTBP53611 331 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 FAM189BP81408 668 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 IKBKEQ14164 716 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 ACAP1Q15027 740 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 PPP1R26Q5T8A7 1209 aaPredicted RBP16.19■□□□□ 0.18
COPS3-201ENST00000268717 SLC24A5Q71RS6 500 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 ZDHHC17Q8IUH5 632 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 KATNAL2Q8IYT4 538 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 MAIP1Q8WWC4 291 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 LPPQ93052 612 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 GUCD1Q96NT3 240 aa16.19■□□□□ 0.18
COPS3-201ENST00000268717 C9IYK1 514 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 CYB561D2O14569 222 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 ERBB2P04626 1255 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 PYGMP11217 842 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 FGFR1P11362 822 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 SCNN1AP37088 669 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 LHX1P48742 406 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 RPL34P49207 117 aaKnown RBP16.18■□□□□ 0.18
COPS3-201ENST00000268717 BCAT1P54687 386 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 RPL7AP62424 266 aaKnown RBP16.18■□□□□ 0.18
COPS3-201ENST00000268717 UPP1Q16831 310 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 CYP4A22Q5TCH4 519 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 PHLDB2Q86SQ0 1253 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 TMEM110Q86TL2 294 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 C12orf29Q8N999 325 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 EIF1ADQ8N9N8 165 aaKnown RBP16.18■□□□□ 0.18
COPS3-201ENST00000268717 ANKRD52Q8NB46 1076 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 SEPT8Q92599 483 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 RUNDC3BQ96NL0 473 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 KRT12Q99456 494 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 SLC4A5Q9BY07 1137 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 MIOSQ9NXC5 875 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 YBX2Q9Y2T7 364 aaKnown RBP16.18■□□□□ 0.18
COPS3-201ENST00000268717 PCDHA11Q9Y5I1 949 aa16.18■□□□□ 0.18
COPS3-201ENST00000268717 ARHGEF37A1IGU5 675 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 RNASE9P60153 205 aaKnown RBP16.17■□□□□ 0.18
COPS3-201ENST00000268717 DEFB103AP81534 67 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 ZNF252P-AS1Q0IIN9 211 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 BST2Q10589 180 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms