RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CDK17Q00537 523 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ORC1Q13415 861 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 E4F1Q66K89 784 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-201ENST00000265304 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ELMSAN1Q6PJG2 1045 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 RBM23Q86U06 439 aaKnown RBP15.13■□□□□ 0.01
SSBP1-201ENST00000265304 SLC47A2Q86VL8 602 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 TTC30AQ86WT1 665 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 SPATA2LQ8IUW3 424 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ZMIZ2Q8NF64 920 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ZNF397Q8NF99 534 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-201ENST00000265304 SLC35F5Q8WV83 523 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 SMARCD1Q96GM5 515 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 MSLNLQ96KJ4 702 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 MYRFLQ96LU7 910 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ZNF518BQ9C0D4 1074 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 AVENQ9NQS1 362 aaPredicted RBP15.13■□□□□ 0.01
SSBP1-201ENST00000265304 CLEC1BQ9P126 229 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 IMPACTQ9P2X3 320 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ASB3Q9Y575 518 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 ATP8B3O60423 1300 aa15.13■□□□□ 0.01
SSBP1-201ENST00000265304 HHLA1C9JL84 531 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 TNFRSF10BO14763 440 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 MED7O43513 233 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CLSTN1O94985 981 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 SETSIPP0DME0 302 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CCDC130P13994 396 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 NPR3P17342 541 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CHRNB2P17787 502 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 IGFBP4P22692 258 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 KRT9P35527 623 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 GPD2P43304 727 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 EPHA5P54756 1037 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 ARPP19P56211 112 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 RPL10AP62906 217 aaKnown RBP15.12■□□□□ 0.01
SSBP1-201ENST00000265304 PLCB2Q00722 1185 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 WDR59Q6PJI9 974 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CLEC20AQ6ZU45 233 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 GLYCTKQ8IVS8 523 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 MICALL1Q8N3F8 863 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 TTC9BQ8N6N2 239 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 OR8K1Q8NGG5 319 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 ZNF707Q96C28 371 aaPredicted RBP15.12■□□□□ 0.01
SSBP1-201ENST00000265304 SMOQ99835 787 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 TTLL2Q9BWV7 592 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 S1PR5Q9H228 398 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CYP4F11Q9HBI6 524 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CYLDQ9NQC7 956 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 MAN1C1Q9NR34 630 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 COMMD8Q9NX08 183 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 TSPAN16Q9UKR8 245 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 INSL5Q9Y5Q6 135 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 BZW2Q9Y6E2 419 aaKnown RBP15.12■□□□□ 0.01
SSBP1-201ENST00000265304 PRUNE2Q8WUY3 3088 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 DENND4AQ7Z401 1863 aa15.12■□□□□ 0.01
SSBP1-201ENST00000265304 CLDN5O00501 218 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 TRIM66O15016 1216 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 MFAP3LO75121 409 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 GFPT2O94808 682 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 C8AP07357 584 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 FOSL2P15408 326 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 ATF6P18850 670 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 BDNFP23560 247 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 BRD2P25440 801 aaKnown RBP15.11■□□□□ 0.01
SSBP1-201ENST00000265304 ELF1P32519 619 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 PLA2G4AP47712 749 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 CACNA2D1P54289 1103 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 BCAT1P54687 386 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 CDR2Q01850 454 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 PLD1Q13393 1074 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 RAB41Q5JT25 222 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 SFMBT2Q5VUG0 894 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 ANKRD54Q6NXT1 300 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 SYCE2Q6PIF2 218 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 NOP9Q86U38 636 aaKnown RBP15.11■□□□□ 0.01
SSBP1-201ENST00000265304 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 SCML4Q8N228 414 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 WDTC1Q8N5D0 677 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 TC2NQ8N9U0 490 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 KCTD13Q8WZ19 329 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 TRMT2BQ96GJ1 504 aaKnown RBP15.11■□□□□ 0.01
SSBP1-201ENST00000265304 PGLYRP2Q96PD5 576 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 PRKD2Q9BZL6 878 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 DMAP1Q9NPF5 467 aaPredicted RBP15.11■□□□□ 0.01
SSBP1-201ENST00000265304 FAM49BQ9NUQ9 324 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 ABI2Q9NYB9 513 aaPredicted RBP15.11■□□□□ 0.01
SSBP1-201ENST00000265304 SLC27A5Q9Y2P5 690 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 YIPF1Q9Y548 306 aa15.11■□□□□ 0.01
SSBP1-201ENST00000265304 SPTBN5Q9NRC6 3674 aaKnown RBP15.11■□□□□ 0.01
SSBP1-201ENST00000265304 XPO1O14980 1071 aaKnown RBP15.1■□□□□ 0.01
SSBP1-201ENST00000265304 LINC01565O15544 149 aa15.1■□□□□ 0.01
SSBP1-201ENST00000265304 BEST1O76090 585 aa15.1■□□□□ 0.01
SSBP1-201ENST00000265304 MICAL2O94851 1124 aa15.1■□□□□ 0.01
SSBP1-201ENST00000265304 LSM8O95777 96 aaKnown RBP15.1■□□□□ 0.01
SSBP1-201ENST00000265304 CYP1A1P04798 512 aaPredicted RBP15.1■□□□□ 0.01
SSBP1-201ENST00000265304 SPATA31D3P0C874 917 aa15.1■□□□□ 0.01
SSBP1-201ENST00000265304 FAM200BP0CF97 657 aa15.1■□□□□ 0.01
SSBP1-201ENST00000265304 SRGAP2BP0DMP2 458 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms