RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 IDI2Q9BXS1 227 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 NMUR2Q9GZQ4 415 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 SSU72Q9NP77 194 aaKnown RBP13.74□□□□□ -0.21
NUP54-201ENST00000264883 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
NUP54-201ENST00000264883 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 PDE5AO76074 875 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 TGDSO95455 350 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 DLDP09622 509 aaKnown RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 MYL2P10916 166 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 SLC1A1P43005 524 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 RPL26P61254 145 aaKnown RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 COG7P83436 770 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 GSTM4Q03013 218 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 DLGAP5Q15398 846 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 DNAL1Q4LDG9 190 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 CCDC89Q8N998 374 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 ACCSQ96QU6 501 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 VPS11Q9H270 941 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 VPS37BQ9H9H4 285 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 PORP16435 677 aaPredicted RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 PSMD7P51665 324 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 MTTPP55157 894 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 KBTBD12Q3ZCT8 623 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 RSBN1LQ6PCB5 846 aaPredicted RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 CAPN12Q6ZSI9 719 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 ANKS1BQ7Z6G8 1248 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 ZFP28Q8NHY6 868 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 GDPD5Q8WTR4 605 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 PPCSQ9HAB8 311 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 PSMC3IPQ9P2W1 217 aaPredicted RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
NUP54-201ENST00000264883 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
NUP54-201ENST00000264883 RBBP6Q7Z6E9 1792 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 ARHGAP10A1A4S6 786 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 ARHGEF35A5YM69 484 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 BIRC5O15392 142 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 STK10O94804 968 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 MXI1P50539 228 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 NCOA4Q13772 614 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 EAPPQ56P03 285 aaPredicted RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 HP1BP3Q5SSJ5 553 aaPredicted RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 GRAMD4Q6IC98 578 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 FBXL19Q6PCT2 694 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 CCDC80Q76M96 950 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 NOP9Q86U38 636 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 ALYREFQ86V81 257 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 METTL25Q8N6Q8 603 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 TCP10LQ8TDR4 215 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 TRIM11Q96F44 468 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 RBM38Q9H0Z9 239 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 FAM198AQ9UFP1 575 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 SLC24A2Q9UI40 661 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 ZNRF3Q9ULT6 936 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 ZNF148Q9UQR1 794 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 GAS7O60861 476 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 RAD17O75943 681 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 HOXD12P35452 270 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 FOLH1Q04609 750 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 KDSRQ06136 332 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 PPIDQ08752 370 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 PTP4A2Q12974 167 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 MDH1BQ5I0G3 518 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 TREML1Q86YW5 311 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 XXYLT1Q8NBI6 393 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 SHC3Q92529 594 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 GRIP2Q9C0E4 1043 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 C12orf65Q9H3J6 166 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 PI4KBQ9UBF8 816 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 ZNF180Q9UJW8 692 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
NUP54-201ENST00000264883 R3HDM2Q9Y2K5 976 aaKnown RBP13.72□□□□□ -0.21
NUP54-201ENST00000264883 TMEM247A6NEH6 219 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 CAPN14A8MX76 684 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 E9PBE3 544 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 F5H6K3 240 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 K7ENM7 598 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 NFKBIEO00221 500 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 TM9SF1O15321 606 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 PEX2P28328 305 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 PCSK6P29122 969 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 FMO1Q01740 532 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 ADRM1Q16186 407 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 MYLK3Q32MK0 819 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 KYAT3Q6YP21 454 aaKnown RBP13.71□□□□□ -0.21
NUP54-201ENST00000264883 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 SLC15A3Q8IY34 581 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms