RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CALML6Q8TD86 181 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 TRAPPC12Q8WVT3 735 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 ZNF606Q8WXB4 792 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 NSMCE4AQ9NXX6 385 aa14.57□□□□□ -0.08
CDH3-201ENST00000264012 E2F8A0AVK6 867 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 STRNO43815 780 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ENO1P06733 434 aaKnown RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 MCF2P10911 925 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 HARS2P49590 506 aaKnown RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 GRIK4Q16099 956 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 MCOLN2Q8IZK6 566 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 GLIS3Q8NEA6 775 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 GLIS2Q9BZE0 524 aaPredicted RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 GRID1Q9ULK0 1009 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 SHPRHQ149N8 1683 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 TMEM247A6NEH6 219 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 TRIM49D1C9J1S8 452 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ZNF263O14978 683 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 MGEA5O60502 916 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 RARGP13631 454 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 FOXD4Q12950 439 aaPredicted RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 TEDDM1Q5T9Z0 273 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 SPOCD1Q6ZMY3 1216 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 SLC26A7Q8TE54 656 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 MRPL46Q9H2W6 279 aaKnown RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 DYRK4Q9NR20 520 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 WHRNQ9P202 907 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 USP18Q9UMW8 372 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 DDX3XO00571 662 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDH3-201ENST00000264012 PSMD10O75832 226 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 THP07101 528 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 BMP6P22004 513 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 FDFT1P37268 417 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ETFBP38117 255 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 PLA2G4AP47712 749 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 PAN2Q504Q3 1202 aaKnown RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 FBXO47Q5MNV8 452 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 RFX8Q6ZV50 586 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 LRRC6Q86X45 466 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ARHGAP18Q8N392 663 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ELMO3Q96BJ8 720 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ERP27Q96DN0 273 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 DCUN1D1Q96GG9 259 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 LRRIQ3A6PVS8 624 aaPredicted RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 FAM107AO95990 144 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 F9P00740 461 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ST13P4Q8IZP2 240 aaPredicted RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 RXFP2Q8WXD0 754 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
CDH3-201ENST00000264012 DISP2A7MBM2 1401 aa14.56□□□□□ -0.08
CDH3-201ENST00000264012 ACKR2O00590 384 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TRIM66O15016 1216 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 HNRNPCL1O60812 293 aaKnown RBP14.55□□□□□ -0.08
CDH3-201ENST00000264012 TMCC1O94876 653 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 SLC2A3P11169 496 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 PPATQ06203 517 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TWF1Q12792 350 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 MEA1Q16626 185 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 PTGISQ16647 500 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 SZRD1Q7Z422 152 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 VSIG10LQ86VR7 867 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TTC30AQ86WT1 665 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 FAM131BQ86XD5 332 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TRIML2Q8N7C3 387 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ANLNQ9NQW6 1124 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ATRNO75882 1429 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 PMPCBO75439 489 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 GLI1P08151 1106 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TRADDQ15628 312 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 MDH1BQ5I0G3 518 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 RNF217Q8TC41 542 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 EPS8L3Q8TE67 593 aaKnown RBP14.55□□□□□ -0.08
CDH3-201ENST00000264012 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 COLEC11Q9BWP8 271 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 KLC4Q9NSK0 619 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ITGA11Q9UKX5 1188 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 RNF103-CHMP3A0A140T963 221 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 PIK3CDO00329 1044 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 KLRC4O43908 158 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 MYL2P10916 166 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ADORA2AP29274 412 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ALDH1A3P47895 512 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CASP5P51878 434 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CCNG2Q16589 344 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CRY2Q49AN0 593 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CBWD6Q4V339 395 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CBWD3Q5JTY5 395 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CBWD5Q5RIA9 395 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TDRD10Q5VZ19 366 aaKnown RBP14.55□□□□□ -0.08
CDH3-201ENST00000264012 SLFN11Q7Z7L1 901 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 BRSK2Q8IWQ3 736 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TMEM121Q9BTD3 319 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 MTIF3Q9H2K0 278 aaKnown RBP14.55□□□□□ -0.08
CDH3-201ENST00000264012 VTA1Q9NP79 307 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 SNTG2Q9NY99 539 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CYP3A7-CYP3A51PA0A087WV96 503 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ANXA9O76027 345 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 CYP3A7P24462 503 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms