RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SMG9Q9H0W8 520 aaKnown RBP17.16■□□□□ 0.34
USE1-201ENST00000263897 NDRG2Q9UN36 371 aaKnown RBP17.16■□□□□ 0.34
USE1-201ENST00000263897 COL4A2P08572 1712 aa17.16■□□□□ 0.34
USE1-201ENST00000263897 GREB1Q4ZG55 1949 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 A8MXQ7 604 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 GFRA3O60609 400 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 SP9P0CG40 484 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 NR2F2P24468 414 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 CCNE1P24864 410 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 RPL13P26373 211 aaKnown RBP17.15■□□□□ 0.34
USE1-201ENST00000263897 GRIK1P39086 918 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 CDH8P55286 799 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 C1orf220Q5T0J3 134 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 ENGASEQ8NFI3 743 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
USE1-201ENST00000263897 ZFYVE19Q96K21 471 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 C8orf33Q9H7E9 229 aaPredicted RBP17.15■□□□□ 0.34
USE1-201ENST00000263897 TDP1Q9NUW8 608 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 SPATA6Q9NWH7 488 aaPredicted RBP17.15■□□□□ 0.34
USE1-201ENST00000263897 THG1LQ9NWX6 298 aaKnown RBP17.15■□□□□ 0.34
USE1-201ENST00000263897 OBSL1O75147 1896 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 PTPRDP23468 1912 aa17.15■□□□□ 0.34
USE1-201ENST00000263897 LAMTOR5O43504 91 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 TADA3O75528 432 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 AKAP3O75969 853 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 VAMP7P51809 220 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 KPNA1P52294 538 aaPredicted RBP17.14■□□□□ 0.33
USE1-201ENST00000263897 ADAM9Q13443 819 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 PNOCQ13519 176 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 ASCL5Q7RTU5 278 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 TAF4BQ92750 862 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 NKD2Q969F2 451 aaPredicted RBP17.14■□□□□ 0.33
USE1-201ENST00000263897 ELMO3Q96BJ8 720 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 MSANTD3Q96H12 275 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 C8orf48Q96LL4 319 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 CYP2S1Q96SQ9 504 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 DPEP3Q9H4B8 488 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 SMYD3Q9H7B4 428 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 LMAN1LQ9HAT1 526 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 GKN1Q9NS71 199 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 CCL26Q9Y258 94 aa17.14■□□□□ 0.33
USE1-201ENST00000263897 TRIM66O15016 1216 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 ANXA13P27216 316 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 MCCD1P59942 119 aaPredicted RBP17.13■□□□□ 0.33
USE1-201ENST00000263897 ZNF268Q14587 947 aaPredicted RBP17.13■□□□□ 0.33
USE1-201ENST00000263897 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 C1orf228Q6PIY5 440 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 DENND5BQ6ZUT9 1274 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 INTS8Q75QN2 995 aaKnown RBP17.13■□□□□ 0.33
USE1-201ENST00000263897 RALGPS2Q86X27 583 aaPredicted RBP17.13■□□□□ 0.33
USE1-201ENST00000263897 B3GALNT2Q8NCR0 500 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 FAM83CQ9BQN1 747 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 B3GNT5Q9BYG0 378 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
USE1-201ENST00000263897 EP300Q09472 2414 aaPredicted RBP17.12■□□□□ 0.33
USE1-201ENST00000263897 PRR23AA6NEV1 266 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 F8VP50 259 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 SPECC1L-ADORA2AF8WAN1 911 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 ASS1P00966 412 aaKnown RBP17.12■□□□□ 0.33
USE1-201ENST00000263897 USP17L7P0C7H9 530 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 CHRNB1P11230 501 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 KRT13P13646 458 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 P4HA1P13674 534 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 PSMC2P35998 433 aaKnown RBP17.12■□□□□ 0.33
USE1-201ENST00000263897 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 SOX9P48436 509 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 USP46P62068 366 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 ENPEPQ07075 957 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 TNK2Q07912 1038 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 ZNF528Q3MIS6 628 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 FAM186BQ8IYM0 893 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
USE1-201ENST00000263897 TTC8Q8TAM2 541 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 SLC22A12Q96S37 553 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 TTLL2Q9BWV7 592 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 SDCBP2Q9H190 292 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 RMND1Q9NWS8 449 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 EHD2Q9NZN4 543 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 R4GN57 208 aa17.12■□□□□ 0.33
USE1-201ENST00000263897 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 TRAV19A0A0A6YYK7 116 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 CLDN5O00501 218 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 CLSTN1O94985 981 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 HLA-DRAP01903 254 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 CTHP32929 405 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 CACNA2D1P54289 1103 aa17.11■□□□□ 0.33
USE1-201ENST00000263897 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
USE1-201ENST00000263897 CSTF1Q05048 431 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms