RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 KCNJ1P48048 391 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 EIF1ADQ8N9N8 165 aaKnown RBP16.65■□□□□ 0.26
VPS26A-201ENST00000263559 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
VPS26A-201ENST00000263559 ERP44Q9BS26 406 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 SLC4A5Q9BY07 1137 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 NEUROG2Q9H2A3 272 aa16.65■□□□□ 0.26
VPS26A-201ENST00000263559 LRCH4O75427 683 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 SETSIPP0DME0 302 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.26
VPS26A-201ENST00000263559 RAB27AP51159 221 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 KLF1Q13351 362 aaPredicted RBP16.64■□□□□ 0.26
VPS26A-201ENST00000263559 ZFYVE27Q5T4F4 411 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 RCOR2Q8IZ40 523 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 OSBPL8Q9BZF1 889 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 RAB17Q9H0T7 212 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.26
VPS26A-201ENST00000263559 TDRD15B5MCY1 1934 aaKnown RBP16.64■□□□□ 0.25
VPS26A-201ENST00000263559 GABBR2O75899 941 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 NNTQ13423 1086 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 ARHGEF6Q15052 776 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 WSCD1Q658N2 575 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 DUPD1Q68J44 220 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 TMEM110Q86TL2 294 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 CCDC105Q8IYK2 499 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 SLC43A3Q8NBI5 491 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 MAIP1Q8WWC4 291 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 ACSF2Q96CM8 615 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-201ENST00000263559 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 MIS12Q9H081 205 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 RSAD1Q9HA92 442 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 CHST7Q9NS84 486 aa16.64■□□□□ 0.25
VPS26A-201ENST00000263559 PODXLO00592 558 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 KRT1P04264 644 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 MFSD7Q6UXD7 560 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 ANKRD52Q8NB46 1076 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 TSEN2Q8NCE0 465 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 C3orf58Q8NDZ4 430 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 ATG4AQ8WYN0 398 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 RBM41Q96IZ5 413 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 SENP8Q96LD8 212 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 PAAF1Q9BRP4 392 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 FAM114A2Q9NRY5 505 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 SQORQ9Y6N5 450 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 CASTOR2A6NHX0 329 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 H3BQF6 201 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 ATP2C2O75185 946 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 GRAP2O75791 330 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 FNTAP49354 379 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 SLC25A11Q02978 314 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 SNX1Q13596 522 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 TRNP1Q6NT89 227 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 TRAF7Q6Q0C0 670 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 SCUBE3Q8IX30 993 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 SLC2A14Q8TDB8 520 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 RAPGEF5Q92565 580 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 TNIP3Q96KP6 325 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 RASAL2Q9UJF2 1139 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 CAND2O75155 1236 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 POMCP01189 267 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 KRT10P13645 584 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 IL1R2P27930 398 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 BST2Q10589 180 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 TAF5Q15542 800 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 STK32AQ8WU08 396 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 ZWILCHQ9H900 591 aa16.63■□□□□ 0.25
VPS26A-201ENST00000263559 DDX56Q9NY93 547 aaKnown RBP16.63■□□□□ 0.25
VPS26A-201ENST00000263559 C2CD4BA6NLJ0 364 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 GABRDO14764 452 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 OAS2P29728 719 aaKnown RBP16.62■□□□□ 0.25
VPS26A-201ENST00000263559 CETN2P41208 172 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 BCAT1P54687 386 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 PRMT2P55345 433 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 ADCY2Q08462 1091 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 MBTPS1Q14703 1052 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 CCDC142Q17RM4 750 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 OLFML1Q6UWY5 402 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 POLNQ7Z5Q5 900 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 RXFP2Q8WXD0 754 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 RUNDC3BQ96NL0 473 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 B3GNT5Q9BYG0 378 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 DCLK3Q9C098 648 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 TRIM17Q9Y577 477 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 PAPSS1O43252 624 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-201ENST00000263559 FAM163BP0C2L3 166 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 GPD1P21695 349 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 TKTP29401 623 aaKnown RBP16.62■□□□□ 0.25
VPS26A-201ENST00000263559 FLT3P36888 993 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 ZNF143P52747 638 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-201ENST00000263559 SLC6A3Q01959 620 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 GPS2Q13227 327 aa16.62■□□□□ 0.25
VPS26A-201ENST00000263559 UPP1Q16831 310 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms