RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 KCNE1P15382 129 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 EFHC2Q5JST6 749 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 NIPA2Q8N8Q9 360 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 ATP6V1G3Q96LB4 118 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 PSMB7Q99436 277 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 CELF4Q9BZC1 486 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.62□□□□□ -1.032e-6■■□□□ 11.7
PTPN3-201ENST00000262539 DDX47Q9H0S4 455 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 RBM12Q9NTZ6 932 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 SNTG2Q9NY99 539 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 NENFQ9UMX5 172 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 DOLKQ9UPQ8 538 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 KBTBD13C9JR72 458 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 SEPT4O43236 478 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 NUDT17P0C025 328 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 HOXB8P17481 243 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 GPD1P21695 349 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 HOXD13P35453 343 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 SHROOM1Q2M3G4 852 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 CLMNQ96JQ2 1002 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ZWILCHQ9H900 591 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 SFMBT1Q9UHJ3 866 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ZNF263O14978 683 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ABHD2P08910 425 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 PDGFRAP16234 1089 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 PTPN9P43378 593 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 SF3A3Q12874 501 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 FSCN1Q16658 493 aaKnown RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ACCSLQ4AC99 568 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 C18orf25Q96B23 403 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ZNF623O75123 536 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 RRM1P23921 792 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 THOC5Q13769 683 aaKnown RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 MMEL1Q495T6 779 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 CRYBG2Q8N1P7 616 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 CYTH2Q99418 400 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 PLEKHA4Q9H4M7 779 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 TMEM191CA6NGB0 347 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 NDUFAB1O14561 156 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 KRT38O76015 456 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 COILP38432 576 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 NNMTP40261 264 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ARL4DP49703 201 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 ASPHQ12797 758 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 RASA2Q15283 850 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 RWDD4Q6NW29 188 aaKnown RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 LRRC71Q8N4P6 559 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 BSNDQ8WZ55 320 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 SNX9Q9Y5X1 595 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 SYNDIG1LA6NDD5 238 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 CD58P19256 250 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 TYMPP19971 482 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 CYP1B1Q16678 543 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 DDX53Q86TM3 631 aaKnown RBP8.61□□□□□ -1.03
PTPN3-201ENST00000262539 CACNA2D3Q8IZS8 1091 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 LRRC1Q9BTT6 524 aa8.61□□□□□ -1.03
PTPN3-201ENST00000262539 FAM95CA0A1B0GW59 222 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 MORF4L2Q15014 288 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 CAPS2Q9BXY5 557 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 ANKZF1Q9H8Y5 726 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 DYRK4Q9NR20 520 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 APOC4-APOC2K7ER74 178 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 GSTA4O15217 222 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 EFCAB14O75071 495 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 APOC2P02655 101 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 LRPAP1P30533 357 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 KLK7P49862 253 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 PLTPP55058 493 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 MBTD1Q05BQ5 628 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 PTPROQ16827 1216 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 ANGPTL8Q6UXH0 198 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 USP6NLQ92738 828 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 KREMEN1Q96MU8 473 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 EPAS1Q99814 870 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 SYT11Q9BT88 431 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 RETREG1Q9H6L5 497 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 DMGDHQ9UI17 866 aaKnown RBP8.6□□□□□ -1.03
PTPN3-201ENST00000262539 SLC24A2Q9UI40 661 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 GGA2Q9UJY4 613 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 ADAM21Q9UKJ8 722 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 SBF2Q86WG5 1849 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 HACD1B0YJ81 288 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 CILPO75339 1184 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 ZBED1O96006 694 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 PROZP22891 400 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 KPNA1P52294 538 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-201ENST00000262539 SNX17Q15036 470 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 FAM102AQ5T9C2 384 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-201ENST00000262539 SLC26A9Q7LBE3 791 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 FGFBP2Q9BYJ0 223 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 PNPLA8Q9NP80 782 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 FIS1Q9Y3D6 152 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 MGEA5O60502 916 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 PDK1Q15118 436 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 BEND5Q7L4P6 421 aa8.6□□□□□ -1.03
PTPN3-201ENST00000262539 ARHGEF19Q8IW93 802 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms