RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 FBXL21Q9UKT6 434 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 EIF3DO15371 548 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPG11-201ENST00000261866 ADCY3O60266 1144 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ALDH2P05091 517 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 CYP11B2P19099 503 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 SLC16A1P53985 500 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ZNF614Q8N883 585 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 PCSK9Q8NBP7 692 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 COG1Q8WTW3 980 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 ETNK1Q9HBU6 452 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 A0A1B0GTH6 734 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 GMNCA6NCL1 334 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 AIM2O14862 343 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 RAD51CO43502 376 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 EPHB3P54753 998 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 MFSD10Q14728 455 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ZNF484Q5JVG2 852 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 SLC47A2Q86VL8 602 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 SYNCRIPO60506 623 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 FGFR1P11362 822 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 CHN1P15882 459 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ACTN3Q08043 901 aaPredicted RBP12.65□□□□□ -0.38
SPG11-201ENST00000261866 NT5DC3Q86UY8 548 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 PHACTR4Q8IZ21 702 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ATXN3LQ9H3M9 355 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 SNX12Q9UMY4 172 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 ALG6Q9Y672 507 aa12.65□□□□□ -0.38
SPG11-201ENST00000261866 STX7O15400 261 aaKnown RBP12.65□□□□□ -0.39
SPG11-201ENST00000261866 ALFQ53S48 1182 aa12.65□□□□□ -0.39
SPG11-201ENST00000261866 ATP6V1G3Q96LB4 118 aa12.65□□□□□ -0.39
SPG11-201ENST00000261866 GTF2A1LQ9UNN4 478 aa12.65□□□□□ -0.39
SPG11-201ENST00000261866 TRIM16O95361 564 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 IMPDH2P12268 514 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 CCL23P55773 120 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 NAB2Q15742 525 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 KYNUQ16719 465 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 GALNTL6Q49A17 601 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 SYTL5Q8TDW5 730 aaPredicted RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 COPS5Q92905 334 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 PACSIN1Q9BY11 444 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 WWOXQ9NZC7 414 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 UVRAGQ9P2Y5 699 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 FAM205AQ6ZU69 1335 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 GCLCP48506 637 aaPredicted RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 CDC16Q13042 620 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 RAD9BQ6WBX8 426 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 OOSP2Q86WS3 158 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 C10orf53Q8N6V4 93 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 STX18Q9P2W9 335 aaKnown RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 RBP3P10745 1247 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 FAM162AQ96A26 154 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 PPP1R3GB7ZBB8 358 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 ATP8B1O43520 1251 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 PYGBP11216 843 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 SKIP12755 728 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 PNPLA4P41247 253 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 SKOR1P84550 965 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 CLEC16AQ2KHT3 1053 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 DOK6Q6PKX4 331 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 NT5MQ9NPB1 228 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 POLBP06746 335 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 PON1P27169 355 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 HSPA9P38646 679 aaKnown RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 NR1H3Q13133 447 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 NR1I3Q14994 352 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 CYTH1Q15438 398 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 ERAP2Q6P179 960 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 UBE2Q2Q8WVN8 375 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 INPP5DQ92835 1189 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 KCNF1Q9H3M0 494 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 OGTO15294 1046 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 OXCT1P55809 520 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
SPG11-201ENST00000261866 GEMIN8Q9NWZ8 242 aaKnown RBP12.64□□□□□ -0.39
SPG11-201ENST00000261866 PCNAP12004 261 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 CPA2P48052 419 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 VGLL4Q14135 290 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 PPP1R14AQ96A00 147 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 SNX5Q9Y5X3 404 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 SKAP2O75563 359 aaPredicted RBP12.63□□□□□ -0.39
SPG11-201ENST00000261866 SERPINI2O75830 405 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 PGK1P00558 417 aa12.63□□□□□ -0.39
SPG11-201ENST00000261866 CALCAP01258 141 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms