RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 SLC10A5Q5PT55 438 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZNF398Q8TD17 642 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 OLA1Q9NTK5 396 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 CPS1P31327 1500 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 TFE3P19532 575 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 HNRNPH3P31942 346 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 CUL2Q13617 745 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 RBBP7Q16576 425 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 KYAT1Q16773 422 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 CROCCP3Q8IVE0 287 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 FAM81AQ8TBF8 368 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 CALML6Q8TD86 181 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 ASAP3Q8TDY4 903 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 WDR60Q8WVS4 1066 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 VPS50Q96JG6 964 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 TMEM79Q9BSE2 394 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 KIAA1683Q9H0B3 1180 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 NRDE2Q9H7Z3 1164 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
CSNK1A1-201ENST00000261798 IGSF9BQ9UPX0 1349 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 DLGAP3O95886 979 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SHBGP04278 402 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ALADP13716 330 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 FDFT1P37268 417 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SPOCD1Q6ZMY3 1216 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 APOPT1Q96IL0 206 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 HACD3Q9P035 362 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SPATA31A3Q5VYP0 1347 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PRKCBP05771 671 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 MLH1P40692 756 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PRKCIP41743 596 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PTGER2P43116 358 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 RGS7P49802 495 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 MARK2Q7KZI7 788 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 TNIP3Q96KP6 325 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ARMCX1Q9P291 453 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 DAGLAQ9Y4D2 1042 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 RPS6KL1Q9Y6S9 549 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SAC3D1A6NKF1 404 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 E9PBE3 544 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 MTSS1O43312 755 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 KLHL41O60662 606 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ENTPD5O75356 428 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SERPINI2O75830 405 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 EFL1Q7Z2Z2 1120 aaKnown RBP11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SLC35C1Q96A29 364 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 THAP1Q9NVV9 213 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 NEXMIFQ5QGS0 1516 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 MSH4O15457 936 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 RAG1P15918 1043 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZNF23P17027 643 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ADRA1DP25100 572 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PBX1P40424 430 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 NCALDP61601 193 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 LACTB2Q53H82 288 aaPredicted RBP11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 SIK2Q9H0K1 926 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 LRMDAQ9H2I8 198 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 TIMM44O43615 452 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 TBC1D12O60347 775 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 RAD17O75943 681 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 CPA3P15088 417 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 MUTP22033 750 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PTK6Q13882 451 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PARP6Q2NL67 630 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 DPP9Q86TI2 863 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ACTL9Q8TC94 416 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 C17orf75Q9HAS0 396 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 ANKEF1Q9NU02 776 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
CSNK1A1-201ENST00000261798 CCDC78A2IDD5 438 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 WFS1O76024 890 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 LCP1P13796 627 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 C2CD6Q53TS8 623 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 NR1H4Q96RI1 486 aaPredicted RBP11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 FAM49AQ9H0Q0 323 aaPredicted RBP11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 MYRFQ9Y2G1 1151 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 SDR42E2A6NKP2 422 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 BCL10O95999 233 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 NFKBIAP25963 317 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 MMP13P45452 471 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 FAM83EQ2M2I3 478 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 CBWD2Q8IUF1 395 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
CSNK1A1-201ENST00000261798 DNAJC18Q9H819 358 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms