RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HESX1Q9UBX0 185 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 AFF4Q9UHB7 1163 aaKnown RBP16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 A0A087X0T9 212 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 TGM5O43548 720 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 AP1G2O75843 785 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 CYP1A1P04798 512 aaPredicted RBP16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 FAM228BP0C875 321 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 FAM200BP0CF97 657 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 KLRC2P26717 231 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 GPD2P43304 727 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 BCAT1P54687 386 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 CCZ1BP86790 482 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 CCZ1P86791 482 aaPredicted RBP16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 PDE4CQ08493 712 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 MTF1Q14872 753 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 GRIN2CQ14957 1233 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 CLEC20AQ6ZU45 233 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 C2orf15Q8WU43 125 aaKnown RBP16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 SECISBP2LQ93073 1101 aaKnown RBP16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 MRPL38Q96DV4 380 aaKnown RBP16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 SMARCD1Q96GM5 515 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 CCDC42Q96M95 316 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 SMOQ99835 787 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 DUSP16Q9BY84 665 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 LHX5Q9H2C1 402 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 ABCB6Q9NP58 842 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 SLC27A5Q9Y2P5 690 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 PTPRDP23468 1912 aa16.73■□□□□ 0.27
CCDC90B-201ENST00000260054 TULP2O00295 520 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 PER2O15055 1255 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 SEC24AO95486 1093 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 UNGP13051 313 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 NPR3P17342 541 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CDH5P33151 784 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CLCN4P51793 760 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 KIF11P52732 1056 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 NOMO3P69849 1222 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 GFPT1Q06210 699 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 BST2Q10589 180 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 DUSP4Q13115 394 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 PTPROQ16827 1216 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 LILRA6Q6PI73 481 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 RAD9BQ6WBX8 426 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 KCNK16Q96T55 309 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 KCNF1Q9H3M0 494 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 DEF6Q9H4E7 631 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CSNK1G1Q9HCP0 422 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 TAS2R14Q9NYV8 317 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CYTH4Q9UIA0 394 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 AKR1B10O60218 316 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CLASP2O75122 1294 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 SOAT2O75908 522 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 SPATA31D3P0C874 917 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 HAPLN1P10915 354 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 ANXA13P27216 316 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 MAGEA11P43364 429 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 GPR15P49685 360 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 MAP3K7CLP57077 242 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CLEC16AQ2KHT3 1053 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 NAA35Q5VZE5 725 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 RBM23Q86U06 439 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 SLC35F5Q8WV83 523 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
CCDC90B-201ENST00000260054 F8VP50 259 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 LSM8O95777 96 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 GLUD1P00367 558 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 SETSIPP0DME0 302 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 SLC18A3Q16572 532 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 ZNF697Q5TEC3 545 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 VSTM1Q6UX27 236 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 DNAAF5Q86Y56 855 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 SCN4BQ8IWT1 228 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 CCDC170Q8IYT3 715 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 TMEM35BQ8NCS4 154 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 CPA5Q8WXQ8 436 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 SEPT5Q99719 369 aaPredicted RBP16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 CYP4F11Q9HBI6 524 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 NAGPAQ9UK23 515 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 NENFQ9UMX5 172 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 SZT2Q5T011 3432 aa16.71■□□□□ 0.27
CCDC90B-201ENST00000260054 PLXNA3P51805 1871 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 ZNF263O14978 683 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 XPO1O14980 1071 aaKnown RBP16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 GRIK1P39086 918 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 PLA2G4AP47712 749 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 CENPCQ03188 943 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 DDR2Q16832 855 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 SDHAF4Q5VUM1 108 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms