RNA–Protein interactions for RNA: ENST00000259939.3

RNF144B-201, Transcript of ring finger protein 144B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF144B, Length 5,036 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144B-201ENST00000259939 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 DYNC1I2Q13409 638 aaKnown RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ARHGEF7Q14155 803 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ACAP1Q15027 740 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ANKS3Q6ZW76 656 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 TAS1R2Q8TE23 839 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ANLNQ9NQW6 1124 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 MOSPD1Q9UJG1 213 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 L1RE1Q9UN81 338 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 PCDHB7Q9Y5E2 793 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 NFIBO00712 420 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 PRRG1O14668 218 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 OR1G1P47890 313 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ALDH18A1P54886 795 aaKnown RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 ELAVL2Q12926 359 aaKnown RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 SPDYCQ5MJ68 293 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 CYP4A22Q5TCH4 519 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 CXorf38Q8TB03 319 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 FUT8Q9BYC5 575 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 MUC3BQ9H195 1237 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
RNF144B-201ENST00000259939 DRG1Q9Y295 367 aaKnown RBP12.62□□□□□ -0.39
RNF144B-201ENST00000259939 M0QYT0 321 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 CELF2O95319 508 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 TGM2P21980 687 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 RPL10AP62906 217 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ST3GAL1Q11201 340 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ZNF268Q14587 947 aaPredicted RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 TNIP2Q8NFZ5 429 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SEPT5Q99719 369 aaPredicted RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 KIF17Q9P2E2 1029 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 STX18Q9P2W9 335 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SDR42E2A6NKP2 422 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 VWA5AO00534 786 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 AP1G2O75843 785 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 PTENP60484 403 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 TMEM62Q0P6H9 643 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 BST2Q10589 180 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 MEA1Q16626 185 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SMTNL2Q2TAL5 461 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SYTL3Q4VX76 610 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 MRNIPQ6NTE8 343 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SPOCD1Q6ZMY3 1216 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 UBE2OQ9C0C9 1292 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 DDIT4Q9NX09 232 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SLIT3O75094 1523 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ATRNO75882 1429 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 KDM1AO60341 852 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ENO1P06733 434 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 PAEPP09466 180 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 HSPA1AP0DMV8 641 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 HSPA1BP0DMV9 641 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 CACNB2Q08289 660 aaPredicted RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 NFE2Q16621 373 aaPredicted RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 TTLL9Q3SXZ7 439 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 PRAMEF18Q5VWM3 479 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ZNF410Q86VK4 478 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 LZICQ8WZA0 190 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 ATXN7L3BQ96GX2 97 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SHOC2Q9UQ13 582 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 O00370 1275 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SRP72O76094 671 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SLITRK3O94933 977 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 E2F4Q16254 413 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 EPC2Q52LR7 807 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 SLFN11Q7Z7L1 901 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 IPMKQ8NFU5 416 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 USP33Q8TEY7 942 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 MAGEB18Q96M61 343 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 MTMR9Q96QG7 549 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
RNF144B-201ENST00000259939 PCDH9Q9HC56 1237 aa12.61□□□□□ -0.39
RNF144B-201ENST00000259939 CLCN3P51790 818 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 THEMIS2Q5TEJ8 643 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 AGAP9Q5VTM2 703 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 ADGRF2Q8IZF7 708 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 GFM2Q969S9 779 aaKnown RBP12.6□□□□□ -0.39
RNF144B-201ENST00000259939 NSL1Q96IY1 281 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 TEKT2Q9UIF3 430 aa12.6□□□□□ -0.39
RNF144B-201ENST00000259939 TRIM49D1C9J1S8 452 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms