RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 NR1I2O75469 434 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 GPD2P43304 727 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ERV3-1Q14264 604 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 CNGA2Q16280 664 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 UGP2Q16851 508 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 GEN1Q17RS7 908 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 GALNTL6Q49A17 601 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 CLEC2AQ6UVW9 174 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 BNIPLQ7Z465 357 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 C12orf56Q8IXR9 622 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF366Q8N895 744 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 UTP15Q8TED0 518 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TTC9Q92623 222 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF566Q969W8 418 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TMIGD2Q96BF3 282 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 USP28Q96RU2 1077 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF184Q99676 751 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 KLHL25Q9H0H3 589 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MVB12BQ9H7P6 319 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ATP13A2Q9NQ11 1180 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SNRKQ9NRH2 765 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 RGS17Q9UGC6 210 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 GTF2IRD1Q9UHL9 959 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF112Q9UJU3 913 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 DIMT1Q9UNQ2 313 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MTF2Q9Y483 593 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MROH2AA6NES4 1674 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 C9IYK1 514 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CYP3A5P20815 502 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 RFX1P22670 979 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CASP14P31944 242 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CDH5P33151 784 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 GRIA2P42262 883 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 PHKA2P46019 1235 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 KCNJ5P48544 419 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 RGS7P49802 495 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 HNRNPMP52272 730 aaKnown RBP eCLIP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 FRG1Q14331 258 aaKnown RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 RGS21Q2M5E4 152 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 USPL1Q5W0Q7 1092 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 PPM1NQ8N819 430 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 PPP4R1Q8TF05 950 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CHPT1Q8WUD6 406 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 GRAMD1AQ96CP6 724 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 HEXIM2Q96MH2 286 aaKnown RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 RANBP9Q96S59 729 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ZSCAN5AQ9BUG6 496 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 FRMD8Q9BZ67 464 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 DPH5Q9H2P9 285 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 IARS2Q9NSE4 1012 aaKnown RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 FAM105AQ9NUU6 356 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 RGS12O14924 1447 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 TRAV20A0A0B4J274 112 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ILVBLA1L0T0 632 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF98A6NK75 572 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 TRPC5OSA6NMA1 111 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 UBXN8O00124 270 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 TAF4O00268 1085 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ZPR1O75312 459 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 IDH1O75874 414 aaKnown RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CALB1P05937 261 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 GM2AP17900 193 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ITGALP20701 1170 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 JAK1P23458 1154 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 HLA-FP30511 346 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 GALNSP34059 522 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CRKP46108 304 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ALDH1A3P47895 512 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ENTPD1P49961 510 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 VCPP55072 806 aaKnown RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 COTL1Q14019 142 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 NCF4Q15080 339 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 KRBOX4Q5JUW0 171 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 C6orf163Q5TEZ5 329 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 LIN54Q6MZP7 749 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 DHRS4L2Q6PKH6 230 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 PAOXQ6QHF9 649 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 CCDC149Q6ZUS6 474 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 GALNT5Q7Z7M9 940 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 DGKHQ86XP1 1220 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 IQCKQ8N0W5 287 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 SLC35F6Q8N357 371 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 RASSF5Q8WWW0 418 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 HPS1Q92902 700 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 LRRC59Q96AG4 307 aaKnown RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 C11orf24Q96F05 449 aaPredicted RBP8.07□□□□□ -1.12
GPNMB-201ENST00000258733 MED15Q96RN5 788 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 C1QTNF7Q9BXJ2 289 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 SLC13A1Q9BZW2 595 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 TMEM60Q9H2L4 133 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 NARFLQ9H6Q4 476 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 SLC38A7Q9NVC3 462 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 TMX2Q9Y320 296 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 PPLO60437 1756 aa8.07□□□□□ -1.12
GPNMB-201ENST00000258733 ALKQ9UM73 1620 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms