RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 MMEL1Q495T6 779 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 EFHC1Q5JVL4 640 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 LRRC38Q5VT99 294 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 MFSD7Q6UXD7 560 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 SPOCD1Q6ZMY3 1216 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 ANKRD23Q86SG2 305 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 JADE3Q92613 823 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 C11orf70Q9BRQ4 267 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 TMEM121Q9BTD3 319 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 CCDC106Q9BWC9 280 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 EHMT1Q9H9B1 1298 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
TROAP-201ENST00000257909 GNPATO15228 680 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.48
TROAP-201ENST00000257909 ZNF862O60290 1169 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 RPS6KA4O75676 772 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 SERPINA6P08185 405 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 SLURP2P0DP57 97 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 SFSWAPQ12872 951 aaKnown RBP12.02□□□□□ -0.48
TROAP-201ENST00000257909 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.48
TROAP-201ENST00000257909 ANKRD20A4Q4UJ75 823 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 CEP55Q53EZ4 464 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 SFT2D3Q587I9 215 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 TFDP3Q5H9I0 405 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 FNBP1LQ5T0N5 605 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 B3GNT9Q6UX72 402 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 B3GNT6Q6ZMB0 384 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 SH2D5Q6ZV89 423 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 PDIK1LQ8N165 341 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 NAT8LQ8N9F0 302 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 NMD3Q96D46 503 aaKnown RBP12.02□□□□□ -0.48
TROAP-201ENST00000257909 SERAC1Q96JX3 654 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 CATSPER2Q96P56 530 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 BTBD9Q96Q07 612 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 PARVAQ9NVD7 372 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 KLHL11Q9NVR0 708 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 CLIC5Q9NZA1 410 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 SIPA1L1O43166 1804 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 LTBP1Q14766 1721 aa12.02□□□□□ -0.48
TROAP-201ENST00000257909 A0A088AWK7 358 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 DCAF8L1A6NGE4 600 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 E5RJQ4 531 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 COPEO14579 308 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 CALCAP01258 141 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 INHBAP08476 426 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 PDK3Q15120 406 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 MSS51Q4VC12 460 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 SV2AQ7L0J3 742 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 PHF13Q86YI8 300 aaPredicted RBP12.02□□□□□ -0.49
TROAP-201ENST00000257909 ALDH16A1Q8IZ83 802 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 SLC44A1Q8WWI5 657 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 CPT1BQ92523 772 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 KCNQ5Q9NR82 932 aa12.02□□□□□ -0.49
TROAP-201ENST00000257909 SMCHD1A6NHR9 2005 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 hCG_1818297A0A087WSY0 165 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 STRNO43815 780 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 RPL5P46777 297 aaKnown RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 ERFP50548 548 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 CLCN2P51788 898 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 HPCAP84074 193 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 DEUP1Q05D60 604 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 MSLNQ13421 630 aaPredicted RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 ATP13A4Q4VNC1 1196 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 HSP90AA5PQ58FG0 334 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 MDH1BQ5I0G3 518 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 C1QTNF12Q5T7M4 302 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 ARID3BQ8IVW6 561 aaPredicted RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 SLC25A41Q8N5S1 370 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 GSTCDQ8NEC7 633 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 SLC35B2Q8TB61 432 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 E2F7Q96AV8 911 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 MFSD14AQ96MC6 490 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 FRMD8P1Q9BZ68 369 aaPredicted RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 HSFX1Q9UBD0 423 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 PEX1O43933 1283 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 CCNT2O60583 730 aaKnown RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 PIAS1O75925 651 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 FAM155BO75949 473 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 AOC1P19801 751 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 DSG3P32926 999 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 AQP4P55087 323 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 NOMO3P69849 1222 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 TMPRSS15P98073 1019 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 ENPEPQ07075 957 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 HSF5Q4G112 596 aaPredicted RBP12.01□□□□□ -0.49
TROAP-201ENST00000257909 UGT2A3Q6UWM9 527 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 CRLF3Q8IUI8 442 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 RAB3IL1Q8TBN0 382 aa12.01□□□□□ -0.49
TROAP-201ENST00000257909 GDPD5Q8WTR4 605 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms