RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 EFTUD2Q15029 972 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■■■■ 39.1
RPA1-201ENST00000254719 TRIP13Q15645 432 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 EAPPQ56P03 285 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 FAM133BQ5BKY9 247 aaKnown RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 XKR3Q5GH77 459 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 FNBP1LQ5T0N5 605 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 PCGF5Q86SE9 256 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 LRRC71Q8N4P6 559 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 NIPA2Q8N8Q9 360 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 PRCCQ92733 491 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 MIEF2Q96C03 454 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 RMDN2Q96LZ7 410 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 ZMAT2Q96NC0 199 aaKnown RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 PPCSQ9HAB8 311 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 STRIP2Q9ULQ0 834 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 TYROBPO43914 113 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 C22orf31O95567 290 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 CD58P19256 250 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 TCF7P36402 384 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 LAMTOR4Q0VGL1 99 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 CTC1Q2NKJ3 1217 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 OTUD1Q5VV17 481 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 LRRC34Q8IZ02 419 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 TMEM35BQ8NCS4 154 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 C16orf70Q9BSU1 422 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 ACAD9Q9H845 621 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 ABCF3Q9NUQ8 709 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 LGALS13Q9UHV8 139 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 CD2APQ9Y5K6 639 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 GMNCA6NCL1 334 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 DDNO94850 711 aaPredicted RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 TJP3O95049 919 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 KRT19P08727 400 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 T-ENOLP0DO92 83 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 IFNAR2P48551 515 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 ZNF534Q76KX8 674 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 GORASP1Q9BQQ3 440 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 ELOVL4Q9GZR5 314 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 C2orf40Q9H1Z8 148 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
RPA1-201ENST00000254719 TPX2Q9ULW0 747 aaKnown RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 G3BP2Q9UN86 482 aaKnown RBP9.65□□□□□ -0.86
RPA1-201ENST00000254719 PI4K2BG5E9Z4 385 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 IFNB1P01574 187 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 PECAM1P16284 738 aaPredicted RBP9.65□□□□□ -0.87
RPA1-201ENST00000254719 BRD2P25440 801 aaKnown RBP9.65□□□□□ -0.87
RPA1-201ENST00000254719 PTPN7P35236 360 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 GCKP35557 465 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 SLCO1A2P46721 670 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 NOP14P78316 857 aaKnown RBP9.65□□□□□ -0.87
RPA1-201ENST00000254719 CCNA1P78396 465 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 CAP1Q01518 475 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 KYNUQ16719 465 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 FAM47EQ6ZV65 393 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 BRSK2Q8IWQ3 736 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 PPP1R13LQ8WUF5 828 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 XPO6Q96QU8 1125 aaKnown RBP9.65□□□□□ -0.87
RPA1-201ENST00000254719 PRMT1Q99873 361 aaKnown RBP9.65□□□□□ -0.87
RPA1-201ENST00000254719 TRIM56Q9BRZ2 755 aaKnown RBP9.65□□□□□ -0.87
RPA1-201ENST00000254719 WHRNQ9P202 907 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 BCAP29Q9UHQ4 241 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 PCDHGC3Q9UN70 934 aa9.65□□□□□ -0.87
RPA1-201ENST00000254719 hCG_1818297A0A087WSY0 165 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 A8MUI8 341 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 TMEM63AO94886 807 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 HOXA11P31270 313 aaPredicted RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 ARHGAP1Q07960 439 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 LIMS2Q7Z4I7 341 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 ZNF677Q86XU0 584 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 KIF2BQ8N4N8 673 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 ANKRD42Q8N9B4 389 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 LRRC8CQ8TDW0 803 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 LRRN4Q8WUT4 740 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 YIPF3Q9GZM5 350 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 RBAKQ9NYW8 714 aaPredicted RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 TTC4O95801 387 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 NFICP08651 508 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 GM2AP17900 193 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 GABRB2P47870 512 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 STXBP2Q15833 593 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 SNCBQ16143 134 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 CYP4A22Q5TCH4 519 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 DPH6Q7L8W6 267 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 RBBP8NLQ8NC74 664 aaPredicted RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 TRIM6Q9C030 488 aaPredicted RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 GREB1Q4ZG55 1949 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 ATP5HO75947 161 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 GPD2P43304 727 aa9.64□□□□□ -0.87
RPA1-201ENST00000254719 MKRN3Q13064 507 aaKnown RBP9.64□□□□□ -0.87
RPA1-201ENST00000254719 KRT81Q14533 505 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms