RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TMEM30AQ9NV96 361 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 ABI2Q9NYB9 513 aaPredicted RBP14.96□□□□□ -0.01
VPS25-201ENST00000253794 TSPAN16Q9UKR8 245 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 YIPF1Q9Y548 306 aa14.96□□□□□ -0.01
VPS25-201ENST00000253794 MTCL1Q9Y4B5 1905 aaKnown RBP14.96□□□□□ -0.02
VPS25-201ENST00000253794 CLDN5O00501 218 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 TRIM66O15016 1216 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 MED7O43513 233 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 GFPT2O94808 682 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 FAM200BP0CF97 657 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 NPR3P17342 541 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 BDNFP23560 247 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 CYP2F1P24903 491 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
VPS25-201ENST00000253794 LTBRP36941 435 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 USP8P40818 1118 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 PDE6CP51160 858 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 BCAT1P54687 386 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 RPL10AP62906 217 aaKnown RBP14.95□□□□□ -0.02
VPS25-201ENST00000253794 E4F1Q66K89 784 aaPredicted RBP14.95□□□□□ -0.02
VPS25-201ENST00000253794 CLEC20AQ6ZU45 233 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 TMC6Q7Z403 805 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 TTC30AQ86WT1 665 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 DRC7Q8IY82 874 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 ZMIZ2Q8NF64 920 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 SLC7A14Q8TBB6 771 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 SFXN1Q9H9B4 322 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 DMAP1Q9NPF5 467 aaPredicted RBP14.95□□□□□ -0.02
VPS25-201ENST00000253794 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 KRT82Q9NSB4 513 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 CLEC1BQ9P126 229 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 ASB3Q9Y575 518 aa14.95□□□□□ -0.02
VPS25-201ENST00000253794 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 PRRG1O14668 218 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 LINC01565O15544 149 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 MFAP3LO75121 409 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 AP1G2O75843 785 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 TPM1P09493 284 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 SPATA31D3P0C874 917 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 ATF6P18850 670 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 CDH5P33151 784 aaPredicted RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 KRT9P35527 623 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 RPL34P49207 117 aaKnown RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 CACNA2D1P54289 1103 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 RBM10P98175 930 aaKnown RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 CDR2Q01850 454 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 BST2Q10589 180 aaKnown RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 GOLGA7BQ2TAP0 167 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 SFMBT2Q5VUG0 894 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 HGSNATQ68CP4 663 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 ANKRD54Q6NXT1 300 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 LLGL2Q6P1M3 1020 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 SPATA31D4Q6ZUB0 917 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 NOP9Q86U38 636 aaKnown RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 CNGA4Q8IV77 575 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 ZNF707Q96C28 371 aaPredicted RBP14.94□□□□□ -0.02
VPS25-201ENST00000253794 MSLNLQ96KJ4 702 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 SMOQ99835 787 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 MED10Q9BTT4 135 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 LHX5Q9H2C1 402 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 IGFLR1Q9H665 355 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 IMPACTQ9P2X3 320 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 HESX1Q9UBX0 185 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 SLC27A5Q9Y2P5 690 aa14.94□□□□□ -0.02
VPS25-201ENST00000253794 HHLA1C9JL84 531 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 TNFRSF10BO14763 440 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 XPO1O14980 1071 aaKnown RBP14.93□□□□□ -0.02
VPS25-201ENST00000253794 THAP12O43422 761 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 TBX10O75333 385 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 MICAL2O94851 1124 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 CALCAP01258 141 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 ADORA2BP29275 332 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 GPD2P43304 727 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 PLA2G4AP47712 749 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 ALDH1A3P47895 512 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 ASIC2Q16515 512 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 PPM1LQ5SGD2 360 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 SYCE2Q6PIF2 218 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 OR8K1Q8NGG5 319 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 OLIG1Q8TAK6 271 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 STK32AQ8WU08 396 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 SLC35F5Q8WV83 523 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 SEPT5Q99719 369 aaPredicted RBP14.93□□□□□ -0.02
VPS25-201ENST00000253794 PRKD2Q9BZL6 878 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 CYLDQ9NQC7 956 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 COMMD8Q9NX08 183 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 IL37Q9NZH6 218 aa14.93□□□□□ -0.02
VPS25-201ENST00000253794 BZW2Q9Y6E2 419 aaKnown RBP14.93□□□□□ -0.02
VPS25-201ENST00000253794 EYSQ5T1H1 3165 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 FAM92AA1XBS5 289 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 AKR1B15C9JRZ8 316 aaPredicted RBP14.92□□□□□ -0.02
VPS25-201ENST00000253794 F8VP50 259 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 RFPL2O75678 378 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 BEST1O76090 585 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 LSM8O95777 96 aaKnown RBP14.92□□□□□ -0.02
VPS25-201ENST00000253794 LRG1P02750 347 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 CHRNB2P17787 502 aa14.92□□□□□ -0.02
VPS25-201ENST00000253794 GRIK1P39086 918 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms