RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TRDMT1O14717 391 aaKnown RBP11.08□□□□□ -0.64
VPS50-201ENST00000251739 GABRDO14764 452 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 EXTL3O43909 919 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 GCNT3O95395 438 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 ITGB3P05106 788 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 CSH1P0DML2 217 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 CSH2P0DML3 217 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 TXLNAP40222 546 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 NASPP49321 788 aaPredicted RBP11.08□□□□□ -0.64
VPS50-201ENST00000251739 USP46P62068 366 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 TFAMQ00059 246 aaKnown RBP11.08□□□□□ -0.64
VPS50-201ENST00000251739 TSPY1Q01534 308 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 USP4Q13107 963 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 SRSF5Q13243 272 aaKnown RBP11.08□□□□□ -0.64
VPS50-201ENST00000251739 SLC39A14Q15043 492 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 LPAL2Q16609 132 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 CFAP221Q4G0U5 840 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 FSTL4Q6MZW2 842 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 CCDC73Q6ZRK6 1079 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 WDR5BQ86VZ2 330 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 STKLD1Q8NE28 680 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 PDE11AQ9HCR9 933 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 GKN1Q9NS71 199 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 TDP1Q9NUW8 608 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 CDV3Q9UKY7 258 aaKnown RBP11.08□□□□□ -0.64
VPS50-201ENST00000251739 RAB23Q9ULC3 237 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 USP18Q9UMW8 372 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 AGAP1Q9UPQ3 857 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 MTMR6Q9Y217 621 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 PCDHB3Q9Y5E6 796 aa11.08□□□□□ -0.64
VPS50-201ENST00000251739 MYOFQ9NZM1 2061 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 CCDC163A0A0D9SF12 145 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 HCRTO43612 131 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 HUS1O60921 280 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 LDHAP00338 332 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 CYP2F1P24903 491 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 HOXD13P35453 343 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 AVPR1AP37288 418 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 SPEM2Q0P670 501 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 RUNX3Q13761 415 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 SIM2Q14190 667 aaPredicted RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 CSRP2Q16527 193 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 SOWAHAQ2M3V2 549 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 SDHAF4Q5VUM1 108 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 TXNDC8Q6A555 127 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 PRR23BQ6ZRT6 265 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 TOP6BLQ8N6T0 577 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 MAB21L3Q8N8X9 362 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 GLIS3Q8NEA6 775 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 KBTBD7Q8WVZ9 684 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 FUBP3Q96I24 572 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS50-201ENST00000251739 RTKNQ9BST9 563 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 PI4K2AQ9BTU6 479 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 MTMR12Q9C0I1 747 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 EBF3Q9H4W6 596 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 TMEM206Q9H813 350 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 SEMA4GQ9NTN9 838 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 THG1LQ9NWX6 298 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 PLXND1Q9Y4D7 1925 aa11.07□□□□□ -0.64
VPS50-201ENST00000251739 MYO18AQ92614 2054 aaKnown RBP11.07□□□□□ -0.64
VPS50-201ENST00000251739 ABCA7Q8IZY2 2146 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 GOLGA8IPA6NC78 632 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 GOLGA8JA6NMD2 632 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 SLC30A4O14863 429 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 KIAA0391O15091 583 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 PRPF40AO75400 957 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 IDEP14735 1019 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 ARSAP15289 507 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 TCF3P15923 654 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 STAT6P42226 847 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 MAGEA11P43364 429 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 RPL10AP62906 217 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 MYL7Q01449 175 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 BFSP1Q12934 665 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 ZNF77Q15935 545 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 TAF12Q16514 161 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 DDR2Q16832 855 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 TRIM68Q6AZZ1 485 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 FAM171BQ6P995 826 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 PRR23CQ6ZRP0 262 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 ADGRF2Q8IZF7 708 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 GPD1LQ8N335 351 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 FAM160A2Q8N612 972 aaPredicted RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 OR5B17Q8NGF7 314 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 NETO1Q8TDF5 533 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 CACTINQ8WUQ7 758 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 MRPS31Q92665 395 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 EZH1Q92800 747 aaPredicted RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 SLC22A12Q96S37 553 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 FBRSL1Q9HCM7 1045 aaKnown RBP11.06□□□□□ -0.64
VPS50-201ENST00000251739 PANK4Q9NVE7 773 aa11.06□□□□□ -0.64
VPS50-201ENST00000251739 INTS13Q9NVM9 706 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms