RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.9■■□□□ 1.742e-6■■■■■ 28.4
SDF2L1-201ENST00000248958 WNT16Q9UBV4 365 aa25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 MAGED2Q9UNF1 606 aaPredicted RBP25.9■■□□□ 1.74
SDF2L1-201ENST00000248958 F11P03951 625 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 WEE1P30291 646 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 GPR158Q5T848 1215 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 SDHAF4Q5VUM1 108 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 POTEHQ6S545 545 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 ACOT1Q86TX2 421 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 TRIM59Q8IWR1 403 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 PBXIP1Q96AQ6 731 aa25.89■■□□□ 1.74
SDF2L1-201ENST00000248958 OBSL1O75147 1896 aa25.89■■□□□ 1.73
SDF2L1-201ENST00000248958 NARSO43776 548 aaKnown RBP25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 LRRN2O75325 713 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 CILPO75339 1184 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 ERCC5P28715 1186 aaPredicted RBP25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 DENND5BQ6ZUT9 1274 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 MRPS31Q92665 395 aaKnown RBP25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 SMARCD1Q96GM5 515 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 ZSWIM3Q96MP5 696 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 KXD1Q9BQD3 176 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 MED10Q9BTT4 135 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 RPP25Q9BUL9 199 aaKnown RBP25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 ZNF518BQ9C0D4 1074 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 FBXL21Q9UKT6 434 aa25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.88■■□□□ 1.73
SDF2L1-201ENST00000248958 NRG2O14511 850 aaPredicted RBP25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 FCARP24071 287 aa25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 YWHAEP62258 255 aaKnown RBP25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 PFKPQ01813 784 aa25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 TPD52L1Q16890 204 aaPredicted RBP25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 TANGO2Q6ICL3 276 aa25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 RBM43Q6ZSC3 357 aaKnown RBP25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 HFE2Q6ZVN8 426 aa25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 FAM35AQ86V20 835 aa25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 DEPDC1BQ8WUY9 529 aa25.87■■□□□ 1.73
SDF2L1-201ENST00000248958 F8VP50 259 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 CD58P19256 250 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 TBXAS1P24557 533 aaPredicted RBP25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 KCNH2Q12809 1159 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 DPCR1Q3MIW9 517 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 ST13P5Q8NFI4 369 aaPredicted RBP25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 TATDN2Q93075 761 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 OBP2AQ9NY56 170 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 HMGXB4Q9UGU5 601 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 MYH10P35580 1976 aa25.86■■□□□ 1.73
SDF2L1-201ENST00000248958 CLDN5O00501 218 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 AFPP02771 609 aaKnown RBP25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 CFHP08603 1231 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 PPP3CCP48454 512 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 GPC5P78333 572 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 CYP4F8P98187 520 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 TMEM150AQ86TG1 271 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 ARID3BQ8IVW6 561 aaPredicted RBP25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 FAM114A1Q8IWE2 563 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 SUGP1Q8IWZ8 645 aaKnown RBP25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 FUKQ8N0W3 1084 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 FBXL6Q8N531 539 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 NT5C1BQ96P26 610 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 TTLL2Q9BWV7 592 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 THAP9Q9H5L6 903 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 DMAP1Q9NPF5 467 aaPredicted RBP25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 CISHQ9NSE2 258 aa25.85■■□□□ 1.73
SDF2L1-201ENST00000248958 ZNF638Q14966 1978 aaKnown RBP25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 PSMC3P17980 439 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 CUL2Q13617 745 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 STXBP5Q5T5C0 1151 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 PAQR9Q6ZVX9 377 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 STKLD1Q8NE28 680 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 WHAMMQ8TF30 809 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 CYFIP2Q96F07 1278 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 CNOT6LQ96LI5 555 aaKnown RBP25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 MED15Q96RN5 788 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 TWNKQ96RR1 684 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 HNRNPABQ99729 332 aaKnown RBP25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 PLA2G2FQ9BZM2 168 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 COMMD8Q9NX08 183 aa25.84■■□□□ 1.73
SDF2L1-201ENST00000248958 DPYSL4O14531 572 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 AP1G2O75843 785 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 RTN3O95197 1032 aaPredicted RBP25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 VITQ6UXI7 678 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 MON1AQ86VX9 555 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 MFSD6LQ8IWD5 586 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 NUP93Q8N1F7 819 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 SLC2A14Q8TDB8 520 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 TRMT61BQ9BVS5 477 aaKnown RBP25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 SLC46A2Q9BY10 475 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 MFSD1Q9H3U5 465 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 CSNK1G1Q9HCP0 422 aa25.83■■□□□ 1.73
SDF2L1-201ENST00000248958 ANAPC1Q9H1A4 1944 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 HEPACAM2A8MVW5 462 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 PFKLP17858 780 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 AVPR1AP37288 418 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 PDE6CP51160 858 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 CACNA2D1P54289 1103 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 ORC1Q13415 861 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 CREBRFQ8IUR6 639 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 CMTM8Q8IZV2 173 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 C12orf29Q8N999 325 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 EHBP1Q8NDI1 1231 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms