RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CCDC151A5D8V7 595 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 CCDC130P13994 396 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 MARCKSL1P49006 195 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
SDF2-201ENST00000247020 ZNF252P-AS1Q0IIN9 211 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 LONRF2Q1L5Z9 754 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 FAM102AQ5T9C2 384 aaPredicted RBP14.95□□□□□ -0.02
SDF2-201ENST00000247020 C8orf74Q6P047 294 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 PMF1Q6P1K2 205 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 ABI1Q8IZP0 508 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 SLC2A14Q8TDB8 520 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 FAM193BQ96PV7 902 aaPredicted RBP14.95□□□□□ -0.02
SDF2-201ENST00000247020 PAAF1Q9BRP4 392 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 PARD6BQ9BYG5 372 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
SDF2-201ENST00000247020 TBC1D13Q9NVG8 400 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 DDX56Q9NY93 547 aaKnown RBP14.95□□□□□ -0.02
SDF2-201ENST00000247020 SMARCAL1Q9NZC9 954 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 TJP2Q9UDY2 1190 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 TBX21Q9UL17 535 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 LRFN2Q9ULH4 789 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 PCDHB8Q9UN66 801 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 PATJQ8NI35 1801 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 NLRC5Q86WI3 1866 aa14.95□□□□□ -0.02
SDF2-201ENST00000247020 GOLGA8SH3BPF8 625 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 KRIT1O00522 736 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 TRAPPC3O43617 180 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 RHOXF2BP0C7M4 288 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 NPR3P17342 541 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 DESP17661 470 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 ADORA2BP29275 332 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 RFC1P35251 1148 aaPredicted RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 SLC6A3Q01959 620 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 TRIM60Q495X7 471 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 OR6B2Q6IFH4 312 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 CC2D1AQ6P1N0 951 aaPredicted RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 FAM183BPQ6ZVS7 135 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 NPAS4Q8IUM7 802 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 FUKQ8N0W3 1084 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 CRIPAKQ8N1N5 446 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 THEM5Q8N1Q8 247 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 EXD1Q8NHP7 514 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 MYCBPAPQ8TBZ2 947 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 HNRNPLLQ8WVV9 542 aaKnown RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 RHOXF2Q9BQY4 288 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 UBXN6Q9BZV1 441 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.94□□□□□ -0.02
SDF2-201ENST00000247020 ASNSD1Q9NWL6 643 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 DPYSL4O14531 572 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 HCRTO43612 131 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 ERLIN1O75477 346 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 DDHD2O94830 711 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 GJB6O95452 261 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 PYGMP11217 842 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 PSMA2P25787 234 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 CETN2P41208 172 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 ZNF143P52747 638 aaPredicted RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 COPS2P61201 443 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 OGDHQ02218 1023 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 RNASELQ05823 741 aaKnown RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 HADHQ16836 314 aaKnown RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 FBXO38Q6PIJ6 1188 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 OLFML1Q6UWY5 402 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 JOSD2Q8TAC2 188 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 RBM41Q96IZ5 413 aaKnown RBP14.94□□□□□ -0.02
SDF2-201ENST00000247020 RUNDC3BQ96NL0 473 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 TMEM175Q9BSA9 504 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 C11orf49Q9H6J7 331 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 CACNG4Q9UBN1 327 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 MTUS1Q9ULD2 1270 aa14.94□□□□□ -0.02
SDF2-201ENST00000247020 FSCN2O14926 492 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 KRT7P08729 469 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 CLTBP09497 229 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 FAM200BP0CF97 657 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 GPD1P21695 349 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 IBSPP21815 317 aaPredicted RBP14.93□□□□□ -0.02
SDF2-201ENST00000247020 IGFBP6P24592 240 aaPredicted RBP14.93□□□□□ -0.02
SDF2-201ENST00000247020 TNFRSF8P28908 595 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 TKTP29401 623 aaKnown RBP14.93□□□□□ -0.02
SDF2-201ENST00000247020 PTPN7P35236 360 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 PCK1P35558 622 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 BRCC3P46736 316 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 CTCFP49711 727 aaPredicted RBP14.93□□□□□ -0.02
SDF2-201ENST00000247020 TAS2R40P59535 323 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 MDH1BQ5I0G3 518 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 INTS6LQ5JSJ4 861 aaKnown RBP14.93□□□□□ -0.02
SDF2-201ENST00000247020 FAM171BQ6P995 826 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 CNKSR3Q6P9H4 555 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 SLC26A9Q7LBE3 791 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 CPNE8Q86YQ8 564 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 SLC13A5Q86YT5 568 aaPredicted RBP14.93□□□□□ -0.02
SDF2-201ENST00000247020 CASD1Q96PB1 797 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 CNPY3Q9BT09 278 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 STIM2Q9P246 746 aa14.93□□□□□ -0.02
SDF2-201ENST00000247020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.92□□□□□ -0.02
SDF2-201ENST00000247020 C2CD4BA6NLJ0 364 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms