RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CYBBP04839 570 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 PCSK1P29120 753 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 ADORA2AP29274 412 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 CLCN3P51790 818 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 THOC5Q13769 683 aaKnown RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 RFX8Q6ZV50 586 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 INPP4AQ96PE3 977 aaPredicted RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 ZNF184Q99676 751 aaPredicted RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 MYLK2Q9H1R3 596 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 TUT1Q9H6E5 874 aaKnown RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 XPNPEP3Q9NQH7 507 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 LSM7Q9UK45 103 aaKnown RBP11.46□□□□□ -0.57
COPA-201ENST00000241704 FRMPD4Q14CM0 1322 aa11.46□□□□□ -0.57
COPA-201ENST00000241704 GLTPD2A6NH11 291 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 NKRFO15226 690 aaKnown RBP eCLIP11.46□□□□□ -0.58
COPA-201ENST00000241704 CDH16O75309 829 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 SSTR3P32745 418 aaPredicted RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 ARFIP2P53365 341 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 SLC12A3P55017 1021 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 ADARP55265 1226 aaKnown RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 ZNF384Q8TF68 577 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 SEPT5Q99719 369 aaPredicted RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 SMYD2Q9NRG4 433 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 TPD52L2O43399 206 aaKnown RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 PHF2O75151 1096 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 TOM1L1O75674 476 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 RPLP2P05387 115 aaKnown RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 PMLP29590 882 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 PPIL2Q13356 520 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 SPRED3Q2MJR0 410 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 MGAT5BQ3V5L5 792 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 RAPH1Q70E73 1250 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 PCGF5Q86SE9 256 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.58
COPA-201ENST00000241704 MCUQ8NE86 351 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 FBXO25Q8TCJ0 367 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 KLC2Q9H0B6 622 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 TJP2Q9UDY2 1190 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.58
COPA-201ENST00000241704 SPECC1L-ADORA2AF8WAN1 911 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 HNRNPRO43390 633 aaKnown RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 PDGFRBP09619 1106 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 NUDT17P0C025 328 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 SP3Q02447 781 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 NME3Q13232 169 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 KRT33BQ14525 404 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 IL17AQ16552 155 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 METTL5Q9NRN9 209 aaKnown RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 NMRK1Q9NWW6 199 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 KLHL8Q9P2G9 620 aaPredicted RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 BCAP29Q9UHQ4 241 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 WDR91A4D1P6 747 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 C2CD2LO14523 706 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 PLA2G6O60733 806 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 ZC3H11AO75152 810 aaKnown RBP eCLIP11.45□□□□□ -0.583e-10■■□□□ 12.7
COPA-201ENST00000241704 PSMD10O75832 226 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 PPARGP37231 505 aaPredicted RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 TMED10P49755 219 aaKnown RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 ARL4CP56559 192 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 CATSPERGQ6ZRH7 1159 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 ATP6V1E2Q96A05 226 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 NR1H4Q96RI1 486 aaPredicted RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 SENP7Q9BQF6 1050 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 BTBD7Q9P203 1132 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 HEY1Q9Y5J3 304 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 HOXA2O43364 376 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 RARGP13631 454 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 HNRNPH3P31942 346 aaKnown RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 EFHC2Q5JST6 749 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 IZUMO2Q6UXV1 221 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 ICA1LQ8NDH6 482 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 SHCBP1Q8NEM2 672 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 ASAP3Q8TDY4 903 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 SPIRE2Q8WWL2 714 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 LENG1Q96BZ8 264 aaPredicted RBP11.45□□□□□ -0.58
COPA-201ENST00000241704 PLEKHG4BQ96PX9 1271 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 CCDC28BQ9BUN5 200 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 TSC22D4Q9Y3Q8 395 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 LRRC42Q9Y546 428 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 PPME1Q9Y570 386 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 ALG6Q9Y672 507 aa11.45□□□□□ -0.58
COPA-201ENST00000241704 E2F6O75461 281 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 B3GAT3O94766 335 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 ASPHQ12797 758 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 KYNUQ16719 465 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 FAF2Q96CS3 445 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 NSL1Q96IY1 281 aa11.44□□□□□ -0.58
COPA-201ENST00000241704 COLEC11Q9BWP8 271 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms