RNA–Protein interactions for RNA: ENST00000240719.7

ZNF549-201, Transcript of zinc finger protein 549, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF549, Length 3,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-201ENST00000240719 NSL1Q96IY1 281 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 KIF13AQ9H1H9 1805 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 AHCYL1O43865 530 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 LDHAP00338 332 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 AQP5P55064 265 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 C16orf46Q6P387 395 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 CES3Q6UWW8 571 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 PSPC1Q8WXF1 523 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 RANBP17Q9H2T7 1088 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 NDE1Q9NXR1 346 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 PRKCBP05771 671 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 PTDSS1P48651 473 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 RASSF3Q86WH2 238 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 WDR75Q8IWA0 830 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 RNF148Q8N7C7 305 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 FAM13CQ8NE31 585 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 EXD1Q8NHP7 514 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 PRPF31Q8WWY3 499 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 SREK1Q8WXA9 508 aaKnown RBP12.36□□□□□ -0.43
ZNF549-201ENST00000240719 CLPTM1LQ96KA5 538 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 KLC2Q9H0B6 622 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 UBAP1Q9NZ09 502 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 GGA2Q9UJY4 613 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 RIPK3Q9Y572 518 aa12.36□□□□□ -0.43
ZNF549-201ENST00000240719 ATP9BO43861 1147 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 LCP1P13796 627 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 MRPS35P82673 323 aaKnown RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 LACTB2Q53H82 288 aaPredicted RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 TTC7BQ86TV6 843 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 CLMNQ96JQ2 1002 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 COMMD10Q9Y6G5 202 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 CLCN3P51790 818 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 GTF2BQ00403 316 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 AP1B1Q10567 949 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 RASA2Q15283 850 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 ANKRD22Q5VYY1 191 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 TRIM72Q6ZMU5 477 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 APOBEC2Q9Y235 224 aaKnown RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 MROH7Q68CQ1 1323 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 ZMPSTE24O75844 475 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 KRT38O76015 456 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 PDE5AO76074 875 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 ZWINTO95229 277 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 CST3P01034 146 aaPredicted RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 RAB27AP51159 221 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 VCPP55072 806 aaKnown RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 YWHAEP62258 255 aaKnown RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 POU5F1Q01860 360 aaKnown RBP12.35□□□□□ -0.43
ZNF549-201ENST00000240719 BNIP1Q12981 228 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 SLC44A4Q53GD3 710 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 ATG16L1Q676U5 607 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 POLNQ7Z5Q5 900 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 ADAM7Q9H2U9 754 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 RNPEPL1Q9HAU8 725 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 PXMP2Q9NR77 195 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 SENP1Q9P0U3 644 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 CHKBQ9Y259 395 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 TELO2Q9Y4R8 837 aa12.35□□□□□ -0.43
ZNF549-201ENST00000240719 C5orf60A6NFR6 353 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 PSTPIP1O43586 416 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 ITGB3P05106 788 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 CD48P09326 243 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 CALB2P22676 271 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 TYK2P29597 1187 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
ZNF549-201ENST00000240719 C15orf59Q2T9L4 293 aaPredicted RBP12.34□□□□□ -0.43
ZNF549-201ENST00000240719 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 TRABD2AQ86V40 505 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 ALYREFQ86V81 257 aaKnown RBP12.34□□□□□ -0.43
ZNF549-201ENST00000240719 MAP4K3Q8IVH8 894 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 TJP2Q9UDY2 1190 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 FNDC3AQ9Y2H6 1198 aaKnown RBP12.34□□□□□ -0.43
ZNF549-201ENST00000240719 NR2E3Q9Y5X4 410 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 ZNF142P52746 1687 aaPredicted RBP12.34□□□□□ -0.43
ZNF549-201ENST00000240719 FCHO1O14526 889 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 MED7O43513 233 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 OATP04181 439 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 FAM200BP0CF97 657 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 GLRA2P23416 452 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 SDC4P31431 198 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 NME3Q13232 169 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
ZNF549-201ENST00000240719 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 NANOGNBQ7Z5D8 188 aa12.34□□□□□ -0.43
ZNF549-201ENST00000240719 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms