RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ORC1Q13415 861 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 CCL15Q16663 113 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 ZSWIM7Q19AV6 140 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 ATF7IP2Q5U623 682 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 FBXO32Q969P5 355 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 S100A13Q99584 98 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 TMEM191CA6NGB0 347 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 PSMA4P25789 261 aaKnown RBP13.7□□□□□ -0.22
NEK9-201ENST00000238616 NUDT2P50583 147 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 SCARF1Q14162 830 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 R3HDM1Q15032 1099 aaKnown RBP13.7□□□□□ -0.22
NEK9-201ENST00000238616 FAM83EQ2M2I3 478 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 SNX30Q5VWJ9 437 aa13.7□□□□□ -0.22
NEK9-201ENST00000238616 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
NEK9-201ENST00000238616 PNMA6AP0CW24 399 aaPredicted RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 UGP2Q16851 508 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 EPHX4Q8IUS5 362 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 ANXA11P50995 505 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 TTLL9Q3SXZ7 439 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 FBXO38Q6PIJ6 1188 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 IL17RAQ96F46 866 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 GINS4Q9BRT9 223 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 F5H5T6 163 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 UMPSP11172 480 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 PRUNE1Q86TP1 453 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 NLRP14Q86W24 1093 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 SCFD2Q8WU76 684 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 KIF24Q5T7B8 1368 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 ITGB3P05106 788 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 CHI3L2Q15782 390 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 FAM71DQ8N9W8 422 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 STK33Q9BYT3 514 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 CYP39A1Q9NYL5 469 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 SEPT3Q9UH03 358 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 DMTNQ08495 405 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 RAD21L1Q9H4I0 556 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 CYP4F12Q9HCS2 524 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 MRPL42Q9Y6G3 142 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 TMED10P49755 219 aaKnown RBP13.69□□□□□ -0.22
NEK9-201ENST00000238616 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 ATL2Q8NHH9 583 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 CAAP1Q9H8G2 361 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 CHST12Q9NRB3 414 aa13.69□□□□□ -0.22
NEK9-201ENST00000238616 COL15A1P39059 1388 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 STXBP3O00186 592 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 SGF29Q96ES7 293 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 TRIP11Q15643 1979 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PDZK1P1A8MUH7 402 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 FAM25AB3EWG3 89 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 FAM25CB3EWG5 89 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 FAM25GB3EWG6 89 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 HUNKP57058 714 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 SGCGQ13326 291 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 BYSLQ13895 437 aaKnown RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 C12orf60Q5U649 245 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.68□□□□□ -0.22
NEK9-201ENST00000238616 AVENQ9NQS1 362 aaPredicted RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 DYRK1BQ9Y463 629 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 A8MX80 341 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PQBP1O60828 265 aaKnown RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 CDC42EP1Q00587 391 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 BRINP3Q76B58 766 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 TRMT11Q7Z4G4 463 aaKnown RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 R3HCC1LQ7Z5L2 792 aaKnown RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 BTBD9Q96Q07 612 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 ROGDIQ9GZN7 287 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 TRIM10Q9UDY6 481 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 AP3D1O14617 1153 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 VPS26AO75436 327 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 MYL4P12829 197 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PPP1R2P1Q96PQ5 205 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.22
NEK9-201ENST00000238616 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 RIC8BQ9NVN3 520 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 ZW10O43264 779 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 GLRBP48167 497 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 CLK2P49760 499 aaKnown RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 TTC33Q6PID6 262 aaPredicted RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 UNC45BQ8IWX7 931 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 ZNF786Q8N393 782 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PRKAA1Q13131 559 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms