RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 GPRC5AQ8NFJ5 357 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 SH3GL3Q99963 347 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 ABI2Q9NYB9 513 aaPredicted RBP12□□□□□ -0.49
LAMA4-201ENST00000230538 APPL1Q9UKG1 709 aa12□□□□□ -0.49
LAMA4-201ENST00000230538 TCF7P36402 384 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 SLC40A1Q9NP59 571 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 H2AFYO75367 372 aaKnown RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 EPHB2P29323 1055 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 DEFA1P59665 94 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 DEFA3P59666 94 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 FUT11Q495W5 492 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TRIM65Q6PJ69 517 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TPCN2Q8NHX9 752 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 SERPINB12Q96P63 405 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TRIM49D1C9J1S8 452 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 M0QYT0 321 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 PMPCBO75439 489 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TARSP26639 723 aaKnown RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 NUDT2P50583 147 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 COPAP53621 1224 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CDH18Q13634 790 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TRIM69Q86WT6 500 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 ZNF34Q8IZ26 560 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CNBD2Q96M20 576 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 MAP3K14Q99558 947 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 FRMD8Q9BZ67 464 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 ZSCAN32Q9NX65 697 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 RNF112Q9ULX5 631 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 EIF3LQ9Y262 564 aaKnown RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 TGM2P21980 687 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 GEMP55040 296 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 LAMC2Q13753 1193 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 AMHR2Q16671 573 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 AGAP9Q5VTM2 703 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 XRRA1Q6P2D8 792 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CACNA2D2Q9NY47 1150 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CAMSAP1Q5T5Y3 1602 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 SLC37A4O43826 429 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 ALBP02768 609 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 ERVK-24P63145 666 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CLEC16AQ2KHT3 1053 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CCDC81Q6ZN84 652 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 CCDC60Q8IWA6 550 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-201ENST00000230538 DTNBP1Q96EV8 351 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 PNKPQ96T60 521 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 BATF3Q9NR55 127 aa11.99□□□□□ -0.49
LAMA4-201ENST00000230538 C17orf102A2RUQ5 167 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 C2orf81A6NN90 581 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 PRKCQQ04759 706 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 PRAMEF18Q5VWM3 479 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SGF29Q96ES7 293 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 TAAR1Q96RJ0 339 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 KCTD10Q9H3F6 313 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 STX7O15400 261 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SGPL1O95470 568 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 LRG1P02750 347 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 CYP2C8P10632 490 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 TTLL9Q3SXZ7 439 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 CCDC92Q53HC0 331 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SHCBP1LQ9BZQ2 653 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 AGPAT3Q9NRZ7 376 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 USP1O94782 785 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 ALOX15P16050 662 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 FNTAP49354 379 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 ZNF177Q13360 481 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 FAXCQ5TGI0 409 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 CACHD1Q5VU97 1274 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SLC13A5Q86YT5 568 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 BLOC1S5Q8TDH9 187 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 EPS8L3Q8TE67 593 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 RUSC1Q9BVN2 902 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 ILKAPQ9H0C8 392 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 MYOZ2Q9NPC6 264 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 LOC102724159A0A0B4J2E5 919 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 A0A1B0GW55 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 F8W810 466 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 LZTS3O60299 673 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4L2P0CJ85 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4L3P0CJ86 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4L4P0CJ87 422 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4L5P0CJ88 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4L6P0CJ89 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 MUTP22033 750 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 RGS2P41220 211 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 PWP2Q15269 919 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 OOSP2Q86WS3 158 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms