RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 HDAC11Q96DB2 347 aa17.49■□□□□ 0.39
PTK7-202ENST00000230419 SERPINB12Q96P63 405 aa17.49■□□□□ 0.39
PTK7-202ENST00000230419 MYCBPQ99417 103 aaPredicted RBP17.49■□□□□ 0.39
PTK7-202ENST00000230419 PORCNQ9H237 461 aa17.49■□□□□ 0.39
PTK7-202ENST00000230419 MMRN1Q13201 1228 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 PKN2Q16513 984 aaKnown RBP17.48■□□□□ 0.39
PTK7-202ENST00000230419 CCNG2Q16589 344 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 ATG16L1Q676U5 607 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 CYB5D1Q6P9G0 228 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 NEMP1O14524 444 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 EML3Q32P44 896 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 ARL13BQ3SXY8 428 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 SLC7A14Q8TBB6 771 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 LCA5LO95447 670 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 CREB1P16220 341 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 ADORA2AP29274 412 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 EPHX2P34913 555 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 GNASQ5JWF2 1037 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 SLC9A9Q8IVB4 645 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 CAMKK2Q96RR4 588 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 RSAD1Q9HA92 442 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 WHRNQ9P202 907 aa17.48■□□□□ 0.39
PTK7-202ENST00000230419 LOC100653049A0A140TA62 436 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 ZC3H11AO75152 810 aaKnown RBP eCLIP17.47■□□□□ 0.39
PTK7-202ENST00000230419 KRT34O76011 436 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 KCNA2P16389 499 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 MAMLD1Q13495 774 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 KCNV1Q6PIU1 500 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 ARID3BQ8IVW6 561 aaPredicted RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 PPIL6Q8IXY8 311 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 UNKQ9C0B0 810 aaKnown RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 TSPAN16Q9UKR8 245 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 GNL1P36915 607 aaPredicted RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 CASP2P42575 452 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 QPCTQ16769 361 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 ZACNQ401N2 412 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 DUPD1Q68J44 220 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 DNAJB3Q8WWF6 145 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 C12orf65Q9H3J6 166 aaKnown RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 KIF9Q9HAQ2 790 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 BFARQ9NZS9 450 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 PHTF1Q9UMS5 762 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 MYH3P11055 1940 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 SLC25A27O95847 323 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 SH2D4BQ5SQS7 431 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 PDCD6IPQ8WUM4 868 aaKnown RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 SGSM3Q96HU1 749 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 UBP1Q9NZI7 540 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 NUDT5Q9UKK9 219 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 HMBSP08397 361 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 NFIL3Q16649 462 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 DENND5BQ6ZUT9 1274 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 CDKL3Q8IVW4 592 aaPredicted RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 BRSK2Q8IWQ3 736 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 TMEM192Q8IY95 271 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
PTK7-202ENST00000230419 ADARB2Q9NS39 739 aaKnown RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
PTK7-202ENST00000230419 TTLL13PA6NNM8 815 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 DDX3YO15523 660 aaKnown RBP17.46■□□□□ 0.39
PTK7-202ENST00000230419 TRIM42Q8IWZ5 723 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 PAFAH2Q99487 392 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 ABCF3Q9NUQ8 709 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 TJP2Q9UDY2 1190 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 COL4A1P02462 1669 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 MAGEB2O15479 319 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 ACO1P21399 889 aaKnown RBP17.46■□□□□ 0.39
PTK7-202ENST00000230419 GRAMD1BQ3KR37 738 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 CES3Q6UWW8 571 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 REPS2Q8NFH8 660 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 OR6P1Q8NGX9 317 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 TMEM176AQ96HP8 235 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 L3MBTL3Q96JM7 780 aaPredicted RBP17.46■□□□□ 0.39
PTK7-202ENST00000230419 MBOAT7Q96N66 472 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 TBC1D12O60347 775 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 TCF4P15884 667 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 CHRNB2P17787 502 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 MIPP30301 263 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 ABCG1P45844 678 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 ZNF157P51786 506 aaPredicted RBP17.46■□□□□ 0.39
PTK7-202ENST00000230419 C1orf146Q5VVC0 180 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 ABHD15Q6UXT9 468 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 LONP2Q86WA8 852 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 FSD1LQ9BXM9 530 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 CCDC68Q9H2F9 335 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
PTK7-202ENST00000230419 ZMYM2Q9UBW7 1377 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 PDHXO00330 501 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 RABGGTBP53611 331 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 JAM2P57087 298 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 TPI1P60174 286 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms