RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 RARBP10826 455 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 SKIV2L2P42285 1042 aaKnown RBP26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 VCPP55072 806 aaKnown RBP26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 PRMT2P55345 433 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 TFDP3Q5H9I0 405 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 PPP1R15BQ5SWA1 713 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 MAP3K21Q5TCX8 1036 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 LLGL2Q6P1M3 1020 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 PHLDB2Q86SQ0 1253 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 OR5B17Q8NGF7 314 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 BEGAINQ9BUH8 593 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 NIF3L1Q9GZT8 377 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 SLC24A2Q9UI40 661 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 ZNF148Q9UQR1 794 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 CEP83Q9Y592 693 aa26.19■■□□□ 1.78
RUNDC3A-201ENST00000225441 ALOX15BO15296 676 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 C6orf222P0C671 652 aaPredicted RBP26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 CAPSQ13938 189 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 GRIK4Q16099 956 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 EFCAB12Q6NXP0 572 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 TTC13Q8NBP0 860 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 ZBTB10Q96DT7 871 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 TGS1Q96RS0 853 aaKnown RBP26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 RXFP1Q9HBX9 757 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 PCDH9Q9HC56 1237 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 ANKFY1Q9P2R3 1169 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 MYADML2A6NDP7 307 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 ATP2C2O75185 946 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 VPS41P49754 854 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 BNIP1Q12981 228 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 MXD4Q14582 209 aaPredicted RBP26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 MFSD10Q14728 455 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 LRRC14Q15048 493 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 MTFR1Q15390 333 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 DUOXA2Q1HG44 320 aa26.18■■□□□ 1.78
RUNDC3A-201ENST00000225441 hCG_1818297A0A087WSY0 165 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 HAS3O00219 553 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 POLR2BP30876 1174 aaKnown RBP26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 PSEN2P49810 448 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 NKX3-2P78367 333 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 OASLQ15646 514 aaKnown RBP26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 C2CD6Q53TS8 623 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 DCUN1D2Q6PH85 259 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 MFSD7Q6UXD7 560 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 ANKRD42Q8N9B4 389 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 MGARPQ8TDB4 240 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 SPC25Q9HBM1 224 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 SSU72Q9NP77 194 aaKnown RBP26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 KLHL14Q9P2G3 628 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 CTNNAL1Q9UBT7 734 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 DNPEPQ9ULA0 475 aa26.17■■□□□ 1.78
RUNDC3A-201ENST00000225441 EXOC1LA0A1B0GW35 172 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 OGTO15294 1046 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 KPNA6O60684 536 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 CREB1P16220 341 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 CLCN3P51790 818 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 PURAQ00577 322 aaKnown RBP26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 LAMTOR4Q0VGL1 99 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 MPP2Q14168 576 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 ZNF268Q14587 947 aaPredicted RBP26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 ZC3H12AQ5D1E8 599 aaKnown RBP26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 CDCA2Q69YH5 1023 aaPredicted RBP26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 MTHFD1LQ6UB35 978 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 CENPUQ71F23 418 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 TRABD2AQ86V40 505 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 CYP4X1Q8N118 509 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 LINC01465Q8N7H1 131 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 FNIP1Q8TF40 1166 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 C9orf72Q96LT7 481 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 C2orf40Q9H1Z8 148 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 SAYSD1Q9NPB0 183 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 RRN3P2A6NIE6 340 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 RASA4BC9J798 803 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 RASA4O43374 803 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 FAM189A1O60320 539 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 PGK1P00558 417 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 TSHRP16473 764 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 ARSEP51690 589 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 ZBTB41Q5SVQ8 909 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 SRRM1Q8IYB3 904 aaKnown RBP26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 SLAIN1Q8ND83 568 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 FAM84AQ96KN4 292 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 KATNAL1Q9BW62 490 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 LHX5Q9H2C1 402 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 XPNPEP3Q9NQH7 507 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 ABCF3Q9NUQ8 709 aa26.16■■□□□ 1.78
RUNDC3A-201ENST00000225441 SMIM10L2AP0DMW4 78 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 SMIM10L2BP0DMW5 78 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 EZRP15311 586 aaKnown RBP26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 RPL7AP62424 266 aaKnown RBP26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 GNASQ5JWF2 1037 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 MARCH8Q5T0T0 291 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 ERICH1Q86X53 443 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 CD248Q9HCU0 757 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 SETD4Q9NVD3 440 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 DNAJC17Q9NVM6 304 aaKnown RBP26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 STARD13Q9Y3M8 1113 aa26.15■■□□□ 1.78
RUNDC3A-201ENST00000225441 ADAMTS4O75173 837 aa26.14■■□□□ 1.78
RUNDC3A-201ENST00000225441 ATP5HO75947 161 aa26.14■■□□□ 1.78
RUNDC3A-201ENST00000225441 UBOX5O94941 541 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms