RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 KLHL14Q9P2G3 628 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 ZNF865P0CJ78 1059 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-201ENST00000223127 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 TBXAS1P24557 533 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-201ENST00000223127 ATP5DP30049 168 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 ANO7Q6IWH7 933 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 RHBDF2Q6PJF5 856 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 CD101Q93033 1021 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 ANKRD36BP1Q96IX9 119 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 NFKBIZQ9BYH8 718 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 MYLK2Q9H1R3 596 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 DNAJC17Q9NVM6 304 aaKnown RBP13.78□□□□□ -0.2
PLOD3-201ENST00000223127 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
PLOD3-201ENST00000223127 COL1A2P08123 1366 aa13.78□□□□□ -0.2
PLOD3-201ENST00000223127 MYL3P08590 195 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 GM2AP17900 193 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 STX2P32856 288 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 TUBP50607 506 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 AP3M2P53677 418 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 BPIFB4P59827 614 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 CALCOCO2Q13137 446 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 AP1ARQ63HQ0 302 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 JADE1Q6IE81 842 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 CYP4X1Q8N118 509 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 C12orf50Q8NA57 414 aaPredicted RBP13.77□□□□□ -0.2
PLOD3-201ENST00000223127 MAGEB18Q96M61 343 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 TMEM237Q96Q45 408 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 LRMDAQ9H2I8 198 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 CDHR5Q9HBB8 845 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 POLIQ9UNA4 740 aa13.77□□□□□ -0.2
PLOD3-201ENST00000223127 A6NJR5 290 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 MAP3K13O43283 966 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 TSPAN1O60635 241 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 ECEL1O95672 775 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 RRM1P23921 792 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 FOXN2P32314 431 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 NSFP46459 744 aaKnown RBP13.77□□□□□ -0.21
PLOD3-201ENST00000223127 RAP1GAPP47736 663 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 CTCFP49711 727 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-201ENST00000223127 ZNF200P98182 395 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-201ENST00000223127 KRT17Q04695 432 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 RNASELQ05823 741 aaKnown RBP13.77□□□□□ -0.21
PLOD3-201ENST00000223127 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 SURF1Q15526 300 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 SGSM1Q2NKQ1 1148 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 THEMIS2Q5TEJ8 643 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 OSMRQ99650 979 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 CISHQ9NSE2 258 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 TXLNGQ9NUQ3 528 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 RNF19AQ9NV58 838 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 GTF3C4Q9UKN8 822 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 DPPA5A6NC42 116 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 KLHL33A6NCF5 533 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 UNGP13051 313 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-201ENST00000223127 TAC1P20366 129 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 ORC1Q13415 861 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 HIC1Q14526 733 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 TCEAL1Q15170 157 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 PARP6Q2NL67 630 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 TEX9Q8N6V9 391 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 NIF3L1Q9GZT8 377 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 ZFYVE28Q9HCC9 887 aa13.77□□□□□ -0.21
PLOD3-201ENST00000223127 SPOPO43791 374 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 B4GALT4O60513 344 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 ITGB3P05106 788 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 FESP07332 822 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 TPBGLP0DKB5 382 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 HOXD8P13378 290 aaPredicted RBP13.76□□□□□ -0.21
PLOD3-201ENST00000223127 CTGFP29279 349 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 FAM47EQ6ZV65 393 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 ERP27Q96DN0 273 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 WHRNQ9P202 907 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 MTUS1Q9ULD2 1270 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 LRRC42Q9Y546 428 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 KAT6AQ92794 2004 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 F2P00734 622 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 CYP1A2P05177 515 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 SLC10A3P09131 477 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 CYP2C9P11712 490 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
PLOD3-201ENST00000223127 RAD23BP54727 409 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 CDH8P55286 799 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 POU5F1BQ06416 359 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 ADCY1Q08828 1119 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 MFSD10Q14728 455 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 FAM187BQ17R55 369 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 ANAPC7Q9UJX3 599 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 HES2Q9Y543 173 aa13.76□□□□□ -0.21
PLOD3-201ENST00000223127 AHCYL1O43865 530 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms