RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 IL10P22301 178 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 CTCFP49711 727 aaPredicted RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 RARRES1P49788 294 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 AMHR2Q16671 573 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 MDH1BQ5I0G3 518 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 RARS2Q5T160 578 aaKnown RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 FAXCQ5TGI0 409 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 ACOT1Q86TX2 421 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 CD302Q8IX05 232 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 FBXO25Q8TCJ0 367 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 STAMBPL1Q96FJ0 436 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 PPP1R2P1Q96PQ5 205 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
NOD1-201ENST00000222823 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.99□□□□□ -0.49
NOD1-201ENST00000222823 CELF2O95319 508 aaKnown RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 MAP3K6O95382 1288 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 ORC1Q13415 861 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 MAPRE1Q15691 268 aaKnown RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 FAM117BQ6P1L5 589 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 AGGF1Q8N302 714 aaeCLIP11.98□□□□□ -0.49
NOD1-201ENST00000222823 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 DTX3LQ8TDB6 740 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 PBXIP1Q96AQ6 731 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 ELMO2Q96JJ3 720 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 SERPINB12Q96P63 405 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 VPS33BQ9H267 617 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 RUBCNLQ9H714 662 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 TRAF3IP3Q9Y228 551 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 TRIM49D1C9J1S8 452 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 SLC26A2P50443 739 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 RBBP7Q16576 425 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 DNAL1Q4LDG9 190 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 LRRC55Q6ZSA7 311 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 TTC30AQ86WT1 665 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 MDM1Q8TC05 714 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 CGRRF1Q99675 332 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 ZNF518BQ9C0D4 1074 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 CCDC90BQ9GZT6 254 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 DDX4Q9NQI0 724 aaKnown RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 ENO3P13929 434 aaPredicted RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 ABCE1P61221 599 aaKnown RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 TWF1Q12792 350 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 SLC25A41Q8N5S1 370 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 TLR10Q9BXR5 811 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 NSMCE4AQ9NXX6 385 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 LRP6O75581 1613 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 MYL2P10916 166 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 GEMIN4P57678 1058 aaKnown RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 DNAJC3Q13217 504 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 PTK2BQ14289 1009 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 SNX17Q15036 470 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 STKLD1Q8NE28 680 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 E2F7Q96AV8 911 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 LBHD1Q9BQE6 289 aaPredicted RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 OSBPL1AQ9BXW6 950 aa11.98□□□□□ -0.49
NOD1-201ENST00000222823 AGO4Q9HCK5 861 aaKnown RBP11.98□□□□□ -0.49
NOD1-201ENST00000222823 PYGLP06737 847 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 RARGP13631 454 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 CYP24A1Q07973 514 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 TFDP3Q5H9I0 405 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 FBXO16Q8IX29 292 aaPredicted RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 CAVIN3Q969G5 261 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 SPATA17Q96L03 361 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 MUC3BQ9H195 1237 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 CISHQ9NSE2 258 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 ABI2Q9NYB9 513 aaPredicted RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 AURKCQ9UQB9 309 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 AP1G2O75843 785 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 MMP14P50281 582 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 MYL6P60660 151 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 ACTRT1Q8TDG2 376 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 TFB1MQ8WVM0 346 aaKnown RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 MTBPQ96DY7 904 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 KCNK16Q96T55 309 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 KIAA1683Q9H0B3 1180 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 WDCPQ9H6R7 721 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 SLC39A10Q9ULF5 831 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 MTO1Q9Y2Z2 717 aaKnown RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 RPS6KL1Q9Y6S9 549 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 E2F8A0AVK6 867 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 B2RBV5 119 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 STK25O00506 426 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 PMPCBO75439 489 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 KLHL2O95198 593 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 STAG3L1P0CL83 205 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 GCLCP48506 637 aaPredicted RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 GTF2A2P52657 109 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 PTGISQ16647 500 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 C10orf120Q5SQS8 335 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 TTC39BQ5VTQ0 682 aaPredicted RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 PRUNE1Q86TP1 453 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 SLC47A2Q86VL8 602 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms