RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CCDC33Q8N5R6 958 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 MICAL1Q8TDZ2 1067 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 TMEM176AQ96HP8 235 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 ZNF317Q96PQ6 595 aaPredicted RBP15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 SMYD3Q9H7B4 428 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 MAGED2Q9UNF1 606 aaPredicted RBP15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 A8MXQ7 604 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 CAPN9O14815 690 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 GRIN3BO60391 1043 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 ACO1P21399 889 aaKnown RBP15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 PTPN20Q4JDL3 420 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 C6orf89Q6UWU4 347 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 RXFP2Q8WXD0 754 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 TFAP2BQ92481 460 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 MED10Q9BTT4 135 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 EPB41L4BQ9H329 900 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 LACTBL1A8MY62 500 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 APOL1O14791 398 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 NFICP08651 508 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 ZNF200P98182 395 aaPredicted RBP15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 LRRC38Q5VT99 294 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 CRELD2Q6UXH1 353 aaPredicted RBP15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 SLCO1B3Q9NPD5 702 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 TTLL3Q9Y4R7 772 aa15.65■□□□□ 0.1
UBE2D4-201ENST00000222402 LY75O60449 1722 aa15.64■□□□□ 0.1
UBE2D4-201ENST00000222402 CCDC195A0A1B0GUA6 201 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 DNAJC8O75937 253 aaPredicted RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ZBTB48P10074 688 aaPredicted RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 INSRRP14616 1297 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ARFIP2P53365 341 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ELF3P78545 371 aaPredicted RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 PDE1BQ01064 536 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 Q3C1V9 767 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 TXNRD3NBQ6F5E7 133 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 RIOX2Q8IUF8 465 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 GLIS1Q8NBF1 620 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ASCC2Q9H1I8 757 aaPredicted RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 PNMA3Q9UL41 463 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 IRF6O14896 467 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ATP5HO75947 161 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 RPA3P35244 121 aaPredicted RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 JADE1Q6IE81 842 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ATP2A3Q93084 1043 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 RXFP1Q9HBX9 757 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ZC3H7BQ9UGR2 993 aaKnown RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ASB14A6NK59 587 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ADM5C9JUS6 153 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ATP6V1G2O95670 118 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 PDGFRBP09619 1106 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 ATP4AP20648 1035 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 KDELR1P24390 212 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 KCNJ2P63252 427 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 GOLGA7BQ2TAP0 167 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 SLCO2A1Q92959 643 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 LBHD1Q9BQE6 289 aaPredicted RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 NIFKQ9BYG3 293 aaKnown RBP15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 MTFR1LQ9H019 292 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 CDT1Q9H211 546 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 BTBD7Q9P203 1132 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 HAO1Q9UJM8 370 aa15.64■□□□□ 0.09
UBE2D4-201ENST00000222402 MICAL2O94851 1124 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 HAUS5O94927 633 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 KITP10721 976 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 ESRRAP11474 423 aaPredicted RBP15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 LCP1P13796 627 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 AMHR2Q16671 573 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 GLRA4Q5JXX5 417 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 GJC2Q5T442 439 aaPredicted RBP15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 VSTM1Q6UX27 236 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 ACOT1Q86TX2 421 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 DEPDC1BQ8WUY9 529 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 RNF34Q969K3 372 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 SLC24A2Q9UI40 661 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 L3MBTL1Q9Y468 752 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 SIGLEC16A6NMB1 481 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 TTLL13PA6NNM8 815 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 LBX2Q6XYB7 198 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 REPS2Q8NFH8 660 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 SLC10A4Q96EP9 437 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 TSNARE1Q96NA8 513 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 FAM111AQ96PZ2 611 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 TSSK1BQ9BXA7 367 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 PPCSQ9HAB8 311 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 IFT122Q9HBG6 1241 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 AAASQ9NRG9 546 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 RNF181Q9P0P0 153 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 DRG1Q9Y295 367 aaKnown RBP15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 AFG3L2Q9Y4W6 797 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 ARFGEF1Q9Y6D6 1849 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 DIAPH2O60879 1101 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 DDNO94850 711 aaPredicted RBP15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 VDRP11473 427 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 NDST1P52848 882 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 CFAP157Q5JU67 520 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 PPFIBP2Q8ND30 876 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 DPP3Q9NY33 737 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 GPRC5DQ9NZD1 345 aa15.63■□□□□ 0.09
UBE2D4-201ENST00000222402 KRT38O76015 456 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms