RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 NKIRAS1Q9NYS0 192 aa23.33■■□□□ 1.33
CCDC9-201ENST00000221922 SIX4Q9UIU6 781 aa23.33■■□□□ 1.33
CCDC9-201ENST00000221922 MCM8Q9UJA3 840 aa23.33■■□□□ 1.33
CCDC9-201ENST00000221922 SIGLEC16A6NMB1 481 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 TCF4P15884 667 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 SMPD1P17405 629 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 STX2P32856 288 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 ZNF268Q14587 947 aaPredicted RBP23.32■■□□□ 1.32
CCDC9-201ENST00000221922 P3H1Q32P28 736 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 WDR72Q3MJ13 1102 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 CYP4A22Q5TCH4 519 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 PLEKHH3Q7Z736 793 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 SRRM1Q8IYB3 904 aaKnown RBP23.32■■□□□ 1.32
CCDC9-201ENST00000221922 PLCD3Q8N3E9 789 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 C1orf127Q8N9H9 656 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 FNIP1Q8TF40 1166 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 TINF2Q9BSI4 451 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 TBK1Q9UHD2 729 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 DRG1Q9Y295 367 aaKnown RBP23.32■■□□□ 1.32
CCDC9-201ENST00000221922 LACTBL1A8MY62 500 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 VTNP04004 478 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 MMP3P08254 477 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 NFICP08651 508 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 KRT10P13645 584 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 P4HA1P13674 534 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 PTPN20Q4JDL3 420 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 TBC1D1Q86TI0 1168 aaPredicted RBP23.32■■□□□ 1.32
CCDC9-201ENST00000221922 VRTNQ9H8Y1 702 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 CYP3A43Q9HB55 503 aa23.32■■□□□ 1.32
CCDC9-201ENST00000221922 hCG_1818297A0A087WSY0 165 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 ARF4P18085 180 aaPredicted RBP23.31■■□□□ 1.32
CCDC9-201ENST00000221922 PSMA2P25787 234 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 RAD23BP54727 409 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 NR1H3Q13133 447 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 CCDC142Q17RM4 750 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 CGB2Q6NT52 195 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 CEP57Q86XR8 500 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 CFAP57Q96MR6 1250 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 ECT2Q9H8V3 914 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 RXFP1Q9HBX9 757 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 ZNF148Q9UQR1 794 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 EFR3BQ9Y2G0 817 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 DNALI1O14645 258 aaPredicted RBP23.31■■□□□ 1.32
CCDC9-201ENST00000221922 KRT3P12035 628 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 NQO1P15559 274 aaKnown RBP23.31■■□□□ 1.32
CCDC9-201ENST00000221922 RAP1GAPP47736 663 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 ACVR2BQ13705 512 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 MTFR1Q15390 333 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 GRIK4Q16099 956 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 IQSEC1Q6DN90 963 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 JADE1Q6IE81 842 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 PRUNE1Q86TP1 453 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 TDRPQ86YL5 185 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 C2orf69Q8N8R5 385 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 GRAMD1AQ96CP6 724 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 DNPEPQ9ULA0 475 aa23.31■■□□□ 1.32
CCDC9-201ENST00000221922 LRRD1A4D1F6 860 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 CSDE1O75534 798 aaKnown RBP23.3■■□□□ 1.32
CCDC9-201ENST00000221922 KRT7P08729 469 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 TAC1P20366 129 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 HADHQ16836 314 aaKnown RBP23.3■■□□□ 1.32
CCDC9-201ENST00000221922 MARCH8Q5T0T0 291 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 RNF43Q68DV7 783 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 ALLCQ8N6M5 410 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 OR6J1Q8NGC5 347 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 CXorf38Q8TB03 319 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 PTPN18Q99952 460 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 UBN1Q9NPG3 1134 aa23.3■■□□□ 1.32
CCDC9-201ENST00000221922 SLC15A5A6NIM6 579 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 RASA4BC9J798 803 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 RASA4O43374 803 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 ITGB3P05106 788 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 EZRP15311 586 aaKnown RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 GCAP28676 217 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 CDKN2BP42772 138 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 PSMC1P62191 440 aaKnown RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 PTPN11Q06124 597 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 DGKDQ16760 1214 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 ZNF410Q86VK4 478 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 NLRP7Q8WX94 980 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 NKD2Q969F2 451 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 CPB2Q96IY4 423 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 TTC25Q96NG3 672 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 FRMD8P1Q9BZ68 369 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 FAM124BQ9H5Z6 455 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 GGT7Q9UJ14 662 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 FAM47DPA6NHR8 397 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 GOLGA8SH3BPF8 625 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 TSPAN1O60635 241 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 SLC18A1P54219 525 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 VCPP55072 806 aaKnown RBP23.29■■□□□ 1.32
CCDC9-201ENST00000221922 FITM2Q8N6M3 262 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 PPP1R16BQ96T49 567 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 SYNCQ9H7C4 482 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 BAIAP2L1Q9UHR4 511 aa23.29■■□□□ 1.32
CCDC9-201ENST00000221922 CITO14578 2027 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 CILPO75339 1184 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 ITGAVP06756 1048 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 ALADP13716 330 aa23.28■■□□□ 1.32
CCDC9-201ENST00000221922 FOXN2P32314 431 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms