RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 EGFL8Q99944 293 aa11.48□□□□□ -0.57
USP31-201ENST00000219689 DDX5P17844 614 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 COMTP21964 271 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 SMU1Q2TAY7 513 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 PYDC2Q56P42 97 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 ZFP1Q6P2D0 407 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 NDUFAF2Q8N183 169 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 TEX13BQ9BXU2 312 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 DNAJC16Q9Y2G8 782 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 SSNA1O43805 119 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 CCDC166P0CW27 439 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 KCNK10P57789 538 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 DPYDQ12882 1025 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 CYB5R4Q7L1T6 521 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 PDS5AQ29RF7 1337 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 F8W8V4 182 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 DGCR6Q14129 220 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 CYB5RLQ6IPT4 315 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 ILKAPQ9H0C8 392 aaPredicted RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 H2AFY2Q9P0M6 372 aaPredicted RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 MRPS22P82650 360 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 AFF4Q9UHB7 1163 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 ARHGEF10O15013 1369 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 PLB1Q6P1J6 1458 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 CCRL2O00421 344 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 FCHO1O14526 889 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 GUCA1CO95843 209 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 IL12AP29459 219 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 C15orf59Q2T9L4 293 aaPredicted RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 IKBIPQ70UQ0 350 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 AGAP3Q96P47 875 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 LAMC3Q9Y6N6 1575 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 NEDD4P46934 1319 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 ITGAXP20702 1163 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 CSNK2BP67870 215 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 SEL1L3Q68CR1 1132 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP31-201ENST00000219689 FNIP1Q8TF40 1166 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 WDR12Q9GZL7 423 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 ZNF221Q9UK13 617 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 ITM2BQ9Y287 266 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 SCN1AP35498 2009 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 DGCR14Q96DF8 476 aaKnown RBP11.47□□□□□ -0.57
USP31-201ENST00000219689 ATP10DQ9P241 1426 aa11.47□□□□□ -0.57
USP31-201ENST00000219689 UBA6A0AVT1 1052 aaPredicted RBP11.46□□□□□ -0.57
USP31-201ENST00000219689 FESP07332 822 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 MAGP20916 626 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 NME3Q13232 169 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 TRPC5OSA6NMA1 111 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 IFT43Q96FT9 208 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 TBC1D10AQ9BXI6 508 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP31-201ENST00000219689 KRT84Q9NSB2 600 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 DMGDHQ9UI17 866 aaKnown RBP11.46□□□□□ -0.57
USP31-201ENST00000219689 DGKBQ9Y6T7 804 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 CYP2D7A0A087X1C5 515 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 MYO1DO94832 1006 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 FCGR1AP12314 374 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 TMC3Q7Z5M5 1100 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 SATL1Q86VE3 508 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 CHSY1Q86X52 802 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 APPL2Q8NEU8 664 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 S100ZQ8WXG8 99 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 MLXQ9UH92 298 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 ZBTB1Q9Y2K1 713 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 ALOX5P09917 674 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 ZNF806P0C7X5 589 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 ZNF37AP17032 561 aaPredicted RBP11.46□□□□□ -0.57
USP31-201ENST00000219689 RAB27AP51159 221 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 SCRN3Q0VDG4 424 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 CDC42EP4Q9H3Q1 356 aaKnown RBP11.46□□□□□ -0.57
USP31-201ENST00000219689 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 GPATCH8Q9UKJ3 1502 aaKnown RBP11.46□□□□□ -0.57
USP31-201ENST00000219689 CYP26A1O43174 497 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 TLR2O60603 784 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 CCNKO75909 580 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 GSTA3Q16772 222 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 OR8H3Q8N146 312 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 SEPHS2Q99611 448 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 SPHKAPQ2M3C7 1700 aa11.46□□□□□ -0.57
USP31-201ENST00000219689 ABLIM1O14639 778 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 SLC16A1P53985 500 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 CHRNB3Q05901 458 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 TXNRD1Q16881 649 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 KDELC2Q7Z4H8 507 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 GRID1Q9ULK0 1009 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 PBRM1Q86U86 1689 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 PAPD7Q5XG87 772 aaKnown RBP11.46□□□□□ -0.58
USP31-201ENST00000219689 TPTE2Q6XPS3 522 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 STX12Q86Y82 276 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 OSBP2Q969R2 916 aa11.46□□□□□ -0.58
USP31-201ENST00000219689 MAGEB5Q9BZ81 275 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms