RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TNS3Q68CZ2 1445 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 PIAS1O75925 651 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CPSF4O95639 269 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 NTSR2O95665 410 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 OTUD4Q01804 1114 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 POU4F1Q01851 419 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 ARHGEF7Q14155 803 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 TRIM65Q6PJ69 517 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 ADAM32Q8TC27 787 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 SCFD1Q8WVM8 642 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 PAK5Q9P286 719 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 RNF112Q9ULX5 631 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 GH1P01241 217 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 RPL10AP62906 217 aaKnown RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 TRAPPC11Q7Z392 1133 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CYP2W1Q8TAV3 490 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CATSPER2Q96P56 530 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 SNX13Q9Y5W8 968 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CASTOR2A6NHX0 329 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 SPRP35270 261 aaPredicted RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 FNTAP49354 379 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 PRCCQ92733 491 aaPredicted RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 ZSWIM1Q9BR11 485 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 EHD4Q9H223 541 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF556Q9HAH1 456 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 GUCA1CO95843 209 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 THPOP40225 353 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 SCTRP47872 440 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 RFX5P48382 616 aaPredicted RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 PDIA6Q15084 440 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM131BQ86XD5 332 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CARNMT1Q8N4J0 409 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 DNAJC16Q9Y2G8 782 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CYBBP04839 570 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 DDX5P17844 614 aaKnown RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 AQP5P55064 265 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 PTPAQ15257 358 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 DNAL1Q4LDG9 190 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 VN1R5Q7Z5H4 357 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 PTAR1Q7Z6K3 402 aaPredicted RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 TXNRD3Q86VQ6 643 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 USP6NLQ92738 828 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 STAMBPL1Q96FJ0 436 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 MAGEB10Q96LZ2 347 aaPredicted RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 TMEM120AQ9BXJ8 343 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNRF3Q9ULT6 936 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 SH3BP1Q9Y3L3 701 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF197O14709 1029 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 KATNA1O75449 491 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 ALFQ53S48 1182 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 TUBGCP3Q96CW5 907 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CALR3Q96L12 384 aaKnown RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 UTP6Q9NYH9 597 aaKnown RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 C6orf203Q9P0P8 240 aaPredicted RBP14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 CTNNAL1Q9UBT7 734 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 GTF2A1LQ9UNN4 478 aa14.12□□□□□ -0.15
TGFBR3-201ENST00000212355 RPA1P27694 616 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 STRIP1Q5VSL9 837 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ATP8B4Q8TF62 1192 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 EDEM1Q92611 657 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 FUT8Q9BYC5 575 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 CDC42EP4Q9H3Q1 356 aaKnown RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 RGS5O15539 181 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 RRM1P23921 792 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 POU1F1P28069 291 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ABCG1P45844 678 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 AP3M2P53677 418 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ORC2Q13416 577 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 PLEKHM3Q6ZWE6 761 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 MTFMTQ96DP5 389 aaKnown RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 PHF21BQ96EK2 531 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ECSITQ9BQ95 431 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 NIF3L1Q9GZT8 377 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 VIPAS39Q9H9C1 493 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 DTNAQ9Y4J8 743 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 SCAMP3O14828 347 aaKnown RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 DLGAP3O95886 979 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM107AO95990 144 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ABCB1P08183 1280 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 TKFCQ3LXA3 575 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 TTC33Q6PID6 262 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF614Q8N883 585 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM172AQ8WUF8 416 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 CINPQ9BW66 212 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 WWOXQ9NZC7 414 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 USP42Q9H9J4 1324 aaKnown RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 CYP11B1P15538 503 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF23P17027 643 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 DNAJB2P25686 324 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 COPAP53621 1224 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 DSG1Q02413 1049 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 ZCCHC23Q6ZST2 131 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 NLRP9Q7RTR0 991 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 CMTM5Q96DZ9 223 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 MARK4Q96L34 752 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms