RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 GANQ9H2C0 597 aa11.25□□□□□ -0.61
MRPS35-201ENST00000081029 CRTAC1Q9NQ79 661 aa11.25□□□□□ -0.61
MRPS35-201ENST00000081029 ZNHIT6Q9NWK9 470 aaKnown RBP11.25□□□□□ -0.61
MRPS35-201ENST00000081029 HMGXB4Q9UGU5 601 aa11.25□□□□□ -0.61
MRPS35-201ENST00000081029 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
MRPS35-201ENST00000081029 C5orf42Q9H799 3197 aa11.25□□□□□ -0.61
MRPS35-201ENST00000081029 HNRNPA1P09651 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
MRPS35-201ENST00000081029 MTHFRP42898 656 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 TUFMP49411 452 aaKnown RBP11.24□□□□□ -0.61
MRPS35-201ENST00000081029 EPHB3P54753 998 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 POLR2FP61218 127 aaKnown RBP11.24□□□□□ -0.61
MRPS35-201ENST00000081029 NTHL1P78549 312 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 SMAD2Q15796 467 aaKnown RBP11.24□□□□□ -0.61
MRPS35-201ENST00000081029 TAF12Q16514 161 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 SDHAF4Q5VUM1 108 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 IQCEQ6IPM2 695 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 REXO1L1PQ8IX06 675 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 B3GALNT2Q8NCR0 500 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 ZNF707Q96C28 371 aaPredicted RBP11.24□□□□□ -0.61
MRPS35-201ENST00000081029 PCED1BQ96HM7 432 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 PPP1R13BQ96KQ4 1090 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 NT5C1BQ96P26 610 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 CORO1BQ9BR76 489 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 MED10Q9BTT4 135 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 POMKQ9H5K3 350 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 SIX2Q9NPC8 291 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 GCNT4Q9P109 453 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 CEP72Q9P209 647 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 PPP2R2CQ9Y2T4 447 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 YIPF1Q9Y548 306 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 TSC2P49815 1807 aa11.24□□□□□ -0.61
MRPS35-201ENST00000081029 DOCK6Q96HP0 2047 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CLDN5O00501 218 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 P4HA2O15460 535 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 FAM163BP0C2L3 166 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 BDNFP23560 247 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 GRIK1P39086 918 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 GPR15P49685 360 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CDK17Q00537 523 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CUL2Q13617 745 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 DDR2Q16832 855 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 C4orf50Q6ZRC1 276 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 C12orf29Q8N999 325 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 STKLD1Q8NE28 680 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 MYCBPAPQ8TBZ2 947 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 SPPL2BQ8TCT7 592 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 ADAMTS19Q8TE59 1207 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 MYLPFQ96A32 169 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 NT5C1AQ9BXI3 368 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CISHQ9NSE2 258 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 FAM49BQ9NUQ9 324 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 MAFFQ9ULX9 164 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 A0A0C4DFX4 3053 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 HAPLN1P10915 354 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 UCHL3P15374 230 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 PTPN2P17706 415 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 FAM171BQ6P995 826 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 CMASQ8NFW8 434 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 LMO3Q8TAP4 145 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 C2orf15Q8WU43 125 aaKnown RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 SUSD6Q92537 303 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 SYN2Q92777 582 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 KAT5Q92993 513 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 NECTIN4Q96NY8 510 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 TWNKQ96RR1 684 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 DESI2Q9BSY9 194 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 UBE2TQ9NPD8 197 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 DNMT3BQ9UBC3 853 aaKnown RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 EPN1Q9Y6I3 576 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-201ENST00000081029 VCANP13611 3396 aa11.23□□□□□ -0.61
MRPS35-201ENST00000081029 PMM2O15305 246 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 CCP110O43303 1012 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 MYL4P12829 197 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 CCDC130P13994 396 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 ADORA2BP29275 332 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 HOXA9P31269 272 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
MRPS35-201ENST00000081029 VEPH1Q14D04 833 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 PABPC1LQ4VXU2 614 aaKnown RBP11.22□□□□□ -0.61
MRPS35-201ENST00000081029 GJB7Q6PEY0 223 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 TRIM65Q6PJ69 517 aa11.22□□□□□ -0.61
MRPS35-201ENST00000081029 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
MRPS35-201ENST00000081029 UNC93AQ86WB7 457 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms