RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PPWD1Q96BP3 646 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 EML4Q9HC35 981 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 DMAP1Q9NPF5 467 aaPredicted RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 LATS2Q9NRM7 1088 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SENP1Q9P0U3 644 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 POLBP06746 335 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 RHOCP08134 193 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 GFAPP14136 432 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 STIP1P31948 543 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 FDFT1P37268 417 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 PTGER2P43116 358 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SERPINB9P50453 376 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 NDST1P52848 882 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 PRMT2P55345 433 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 MUM1Q2TAK8 710 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 LRP10Q7Z4F1 713 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 ZDHHC17Q8IUH5 632 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 GAD1Q99259 594 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 UBXN6Q9BZV1 441 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SLC13A1Q9BZW2 595 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SYNCRIPO60506 623 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 KCNA4P22459 653 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 IL1RL1Q01638 556 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SMAD1Q15797 465 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 DUSP28Q4G0W2 176 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 NUDCD3Q8IVD9 361 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 RBM15Q96T37 977 aaKnown RBP eCLIP10.79□□□□□ -0.688e-6■■■■□ 19.3
NIPAL3-201ENST00000003912 PDGFDQ9GZP0 370 aaPredicted RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 MRPL17Q9NRX2 175 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 VPS28Q9UK41 221 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 STX7O15400 261 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 YWHAQP27348 245 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ATXN7L3BQ96GX2 97 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 TNFSF13BQ9Y275 285 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 NEU2Q9Y3R4 380 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CAPN7Q9Y6W3 813 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 USP27XA6NNY8 438 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 FGRP09769 529 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PNMA6AP0CW24 399 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ESRRAP11474 423 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 BRAFP15056 766 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CRYBB1P53674 252 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 GEMIN4P57678 1058 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PTK6Q13882 451 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 LBX2Q6XYB7 198 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PPTC7Q8NI37 304 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PDLIM2Q96JY6 352 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 TRIM15Q9C019 465 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ATXN3LQ9H3M9 355 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PPCSQ9HAB8 311 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 SLIT2O94813 1529 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 F8VZ95 297 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 TRIM66O15016 1216 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PRPF4O43172 522 aaKnown RBP eCLIP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 DCTN3O75935 186 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CCL23P55773 120 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 IFT88Q13099 833 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 RAD9BQ6WBX8 426 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CCDC149Q6ZUS6 474 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 KIRREL3Q8IZU9 778 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 FIBCD1Q8N539 461 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 USP38Q8NB14 1042 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 GOLPH3Q9H4A6 298 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CRLS1Q9UJA2 301 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CCDC85CA6NKD9 419 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CFLARO15519 480 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 EFCAB14O75071 495 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 PAEPP09466 180 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 CCR1P32246 355 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 GCNT1Q02742 428 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 DGKZQ13574 1117 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ARMC6Q6NXE6 501 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKS3Q6ZW76 656 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 TRMT10CQ7L0Y3 403 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 KIAA0895Q8NCT3 520 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 C20orf96Q9NUD7 363 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 FGFR1OP2Q9NVK5 253 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 TSPAN16Q9UKR8 245 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 AAR2Q9Y312 384 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 KIF13AQ9H1H9 1805 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 A0A0G2JND7 137 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 C2orf81A6NN90 581 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ABRAQ8N0Z2 381 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 ELMO2Q96JJ3 720 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 DNAJC7Q99615 494 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 SNCAIPQ9Y6H5 919 aa10.78□□□□□ -0.68
NIPAL3-201ENST00000003912 IGFBP4P22692 258 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 GLRA2P23416 452 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 ACAT1P24752 427 aaKnown RBP10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKRD20A4Q4UJ75 823 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKRD20A8PQ5CZ79 823 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 ZRANB3Q5FWF4 1079 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKRD20A2Q5SQ80 823 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 SYCP2LQ5T4T6 812 aa10.77□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKRD20A1Q5TYW2 823 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms