RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr67F8VPJ8 320 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Vmn2r4K7N784 913 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ms4a2P20490 235 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ptpn5P54830 541 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Gpd1lQ3ULJ0 351 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fam118bQ8C569 351 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Parp9Q8CAS9 866 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ascc2Q91WR3 749 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ap4s1Q9WVL1 144 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Kiaa1551Q5DTW7 1521 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Scgb2b11A0A087WR49 112 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tmem45a2B7ZWJ5 289 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 EXOC1LB9EK06 172 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Fam129cD3YZB0 591 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Erich1E9PY43 332 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rab17P35292 214 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rnpc3Q3UZ01 514 aaKnown RBP12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 TbataQ7TSD4 393 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Sept9Q80UG5 583 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Pcdha9Q91Y11 979 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 SnrpfP62307 86 aaKnown RBP12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ttc39dQ0VF76 604 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Foxn1Q61575 648 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Slc9c1Q6UJY2 1175 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Kcnf1Q7TSH7 493 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Pnma3Q8JZW8 466 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 MyripQ8K3I4 856 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ndufaf1Q9CWX2 328 aa12.37□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ccdc88cQ6VGS5 2009 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Vmn2r31L7N1Z4 861 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Asna1O54984 348 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Gm4952Q5FW57 296 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Psen2Q61144 448 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 ZfatQ7TS63 1237 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Mzt2Q9CQ25 159 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Large1Q9Z1M7 756 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Eif2ak3Q9Z2B5 1114 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Krt6bQ9Z331 562 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Kctd14A0A0U1RNG7 287 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 PbsnO08976 174 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Clk2O35491 499 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Rrm2P11157 390 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 SarsP26638 512 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Krt86P97861 486 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Klra8Q60682 266 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Als2clQ60I26 952 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Celf4Q7TSY6 486 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ddx47Q9CWX9 455 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Srsf11E9Q6E5 511 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ndufaf2Q59J78 168 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 A1cfQ5YD48 595 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Usp1Q8BJQ2 784 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Cdc16Q8R349 620 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Nipsnap3bQ9CQE1 247 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Mrto4Q9D0I8 239 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 RnmtQ9D0L8 465 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Terb2Q9D494 218 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Poc5Q9DBS8 558 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tssc4Q9JHE7 317 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tada2bD3Z4Z0 420 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Trim30bE9PVL6 203 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 PtproE9Q612 1226 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Olfr292F8VQ84 308 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tp53P02340 387 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tgm2P21981 686 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Pou1f1Q00286 291 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Zfp607aQ3TQG9 686 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Plcl1Q3USB7 1096 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ndfip2Q91ZP6 311 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Sh3bp5lQ99LH9 392 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Usp31E9Q6Y8 1344 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 PdynO35417 248 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Sco1Q5SUC9 284 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Ferd3lQ923Z4 168 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Adamts12Q811B3 1600 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tsc22d2E9Q7M2 769 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Itga7Q61738 1179 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Sel1l3Q80TS8 1137 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 TiprlQ8BH58 271 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Plekhm3Q8BM47 761 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Zfp398Q8BV16 643 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 4930519G04RikQ9CPT7 205 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Klra17Q9JMA4 273 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Iqgap1Q9JKF1 1657 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Olfm1O88998 485 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Myl12aQ6ZWQ9 172 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Camkk2Q8C078 588 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Slc9b1Q8C0X2 565 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Mrgprx1Q8CIP3 322 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Cdk17Q8K0D0 523 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Snapc1Q8K0S9 389 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Brd8Q8R3B7 951 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 RnpepQ8VCT3 650 aaKnown RBP12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Emc2Q9CRD2 297 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Slc12a4Q9JIS8 1085 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 Myh7bA2AQP0 1941 aa12.36□□□□□ -0.43
Trim56-201ENSMUST00000054384 ThraP63058 492 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Oca2Q62052 833 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Trim50Q810I2 483 aa12.35□□□□□ -0.43
Trim56-201ENSMUST00000054384 Tc2nQ91XT6 489 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms