RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 RubcnlQ3TD16 648 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Ddr2Q62371 854 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Rnf220Q6PDX6 566 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Khdc3Q9CWU5 440 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Cdyl2Q9D5D8 503 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Adamts13Q769J6 1426 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Mcpt1P11034 246 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Rexo4Q6PAQ4 432 aaKnown RBP11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 MybP06876 636 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Proser1Q5PRE5 913 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Stip1Q60864 543 aaKnown RBP11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Sv2cQ69ZS6 727 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Ccnt2Q7TQK0 723 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Camta2Q80Y50 1208 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Psmd10Q9Z2X2 231 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Rhbdl2A2AGA4 302 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Il17raQ60943 864 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 CluhQ5SW19 1315 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Btbd18A0A0A6YY25 723 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Trim30bE9PVL6 203 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Gimd1E9PW74 217 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Gm8926L7MUE8 181 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Mcpt4P21812 246 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 RalaP63321 206 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Q3U4G0 281 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Myo1dQ5SYD0 1006 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Scnn1aQ61180 699 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Nars2Q8BGV0 477 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Fbxl13Q8CDU4 790 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 PlekQ9JHK5 350 aaKnown RBP11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Add1Q9QYC0 735 aaKnown RBP11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Tdrd5Q5VCS6 1040 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Llgl1Q80Y17 1036 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Spire2Q8K1S6 718 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 HaspinQ9Z0R0 754 aa11.1□□□□□ -0.63
Nipbl-201ENSMUST00000052965 C87977A2A958 498 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Abcb1bP06795 1276 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 PrkcdP28867 674 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Pou6f1Q07916 301 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Trnau1apQ80VC6 287 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Hmgxb4Q80Y32 594 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Dlgap2Q8BJ42 1059 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 P3h2Q8CG71 703 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Ndufa10Q99LC3 355 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Rabl3Q9D4V7 236 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Edf1Q9JMG1 148 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Nr1h3Q9Z0Y9 445 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Zmym2Q9CU65 1376 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Atxn7l3bQ3UD01 97 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Hoxa13Q62424 386 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Phf21aQ6ZPK0 659 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Sh3kbp1Q8R550 709 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Tbc1d19Q8VDV7 526 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Cyp2c23E9Q5K4 494 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Nedd8P29595 81 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Nr1d2Q60674 576 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Rbl2Q64700 1135 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Stk32aQ8BGW6 398 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Gtf3c4Q8BMQ2 817 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Camk1dQ8BW96 385 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Lsm14aQ8K2F8 462 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Slc12a4Q9JIS8 1085 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Cpsf3Q9QXK7 684 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Vwa5b1A9Z1V5 1215 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Abcb5B5X0E4 1255 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Sema4dO09126 861 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 AmacrO09174 381 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Atn1O35126 1175 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Zfp454Q80Y34 536 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Strip1Q8C079 837 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Teddm1bQ8CC62 306 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Ccdc59Q8R2N0 240 aaKnown RBP11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 St7Q99M96 577 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Sike1Q9CPR7 207 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Trpc4Q9QUQ5 974 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Pdpk1Q9Z2A0 559 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 AK157302I3ITR1 129 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Kpna4O35343 521 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Vti1bO88384 232 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 BrafP28028 804 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Ptprn2P80560 1001 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Qrich1Q3UA37 777 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Tdpoz4Q6YCH2 370 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Nsun6Q7TS68 476 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 GanQ8CA72 597 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Mad2l2Q9D752 211 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Isca1Q9D924 129 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Maged2Q9ER67 616 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Ifi206G3UZV2 921 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Cul4aQ3TCH7 759 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Tmem117Q8BH18 514 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Rab15Q8K386 212 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Nme5Q99MH5 211 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Lztr1Q9CQ33 837 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Golph3Q9CRA5 298 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Zfp266E9Q2S7 604 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Zcwpw1Q6IR42 630 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Akr1e2Q9DCT1 301 aa11.09□□□□□ -0.63
Nipbl-201ENSMUST00000052965 Kctd21Q3URF8 260 aa11.08□□□□□ -0.64
Nipbl-201ENSMUST00000052965 Traf3Q60803 567 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 86 ms