RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Esyt3Q5DTI8 891 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Zbtb17Q60821 794 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 PostnQ62009 838 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Fgfr1opQ66JX5 399 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Baiap3Q80TT2 1134 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Arhgap15Q811M1 481 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Lig4Q8BTF7 911 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Kank2Q8BX02 843 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Eif3hQ91WK2 352 aaKnown RBP24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Smc6Q924W5 1097 aa24.09■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Ms4a14A0A087WSD2 1232 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Zscan4-ps1A0A1C7CYV3 506 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Zscan4dA7KBS4 506 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Arhgef26D3YYY8 869 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 C2cd2E9Q3C1 696 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Akr1b10G5E895 316 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 DsppP97399 934 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Zscan4fQ3URS2 506 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Traf3Q60803 567 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Scube3Q66PY1 993 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Prl3a1Q78Y73 227 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Zscan4cQ80VJ6 506 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Slc9a4Q8BUE1 797 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Parp10Q8CIE4 960 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Glis1Q8K1M4 789 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Dnajc28Q8VCE1 385 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 B3galt6Q91Z92 325 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Plxna1P70206 1894 aa24.08■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Zfp990B1AVN5 605 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Cdc6O89033 562 aaKnown RBP24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Slc10a3P21129 473 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Lmnb2P21619 596 aaKnown RBP24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Q3TQQ9 903 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Fam193bQ3U2K0 892 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Nop53Q8BK35 484 aaKnown RBP24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tmx4Q8C0L0 335 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Ndufaf7Q9CWG8 436 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Ddx56Q9D0R4 546 aaKnown RBP24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Ccdc91Q9D8L5 442 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tnni1Q9WUZ5 187 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Grk1Q9WVL4 564 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Trim30cD3YVI9 513 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Nr1d1Q3UV55 615 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Krt42Q6IFX2 452 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Gpsm1Q6IR34 673 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Q8BWG4 1187 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 KyQ8C8H8 661 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tbx22Q8K402 517 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 PawrQ925B0 333 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Capn12Q9ER56 720 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Homer2Q9QWW1 354 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Kank3Q9Z1P7 791 aa24.07■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Stk40Q7TNL3 435 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Polr2eQ80UW8 210 aaKnown RBP24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Ccdc181Q80ZU5 509 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Epn2Q8CHU3 595 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Eps8l2Q99K30 729 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Bbs5Q9CZQ9 341 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Arl2bpQ9D385 163 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Hdhd2Q3UGR5 259 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Spout1Q3UHX9 385 aaKnown RBP24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Cyp2j11Q3UNV2 504 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tars2Q3UQ84 723 aaKnown RBP24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Ppp1r26Q6A025 1163 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Fam109aQ8BH49 266 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Aipl1Q924K1 328 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Spred2Q924S7 410 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Gins2Q9D600 185 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Rdh14Q9ERI6 334 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Gtf2ird1Q9JI57 1104 aaKnown RBP24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Nr1h3Q9Z0Y9 445 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Bnip3lQ9Z2F7 218 aa24.06■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Pramef17A2ASJ1 475 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Trim55G3X8Y1 545 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Znf800Q0VEE6 662 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tcp10aQ80W76 438 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 DcakdQ8BHC4 231 aaKnown RBP24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Fbxw21Q8BI38 468 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Gpc5Q8CAL5 572 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tmem132cQ8CEF9 1099 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Mcoln2Q8K595 566 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Nme7Q9QXL8 395 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Scnn1bQ9WU38 638 aa24.05■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Gm6657A0A1B0GRJ3 277 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Myl1P05977 188 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Fcer2P20693 331 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Creb3l2Q8BH52 521 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Slc9a7Q8BLV3 726 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Abraxas1Q8BPZ8 407 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Zfp446Q8C9M8 523 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Tp53inp2Q8CFU8 221 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Ace2Q8R0I0 805 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 CactinQ9CS00 772 aaKnown RBP24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Piwil1Q9JMB7 862 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Arhgef10Q8C033 1345 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Znf804aA2AKY4 1200 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Zfpm1O35615 995 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Birc5O70201 140 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Hsd17b1P51656 344 aa24.04■■□□□ 1.44
Upf3a-201ENSMUST00000043767 Rbm20Q3UQS8 1199 aaKnown RBP24.04■■□□□ 1.44
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms