RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Mapk15Q80Y86 549 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Neto2Q8BNJ6 525 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Q8CD60 292 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Adgrg2Q8CJ12 1009 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Acvr1cQ8K348 493 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Dnajc18Q9CZJ9 357 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ddx56Q9D0R4 546 aaKnown RBP14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Polr3cQ9D483 533 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tekt1Q9DAJ2 418 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gdap2Q9DBL2 498 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Chrac1Q9JKP8 129 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nudt5Q9JKX6 218 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ptpn4Q9WU22 926 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gadd45gQ9Z111 159 aa14.04□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gon4lQ9DB00 2260 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Maml3D4QGC2 1135 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zfp94E9Q6Y4 486 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gm3424L7N298 263 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gm8246M0QWX9 263 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 PkmP52480 531 aaKnown RBP14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tbx3P70324 741 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gata5P97489 404 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Myl6Q60605 151 aaKnown RBP14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 March4Q80TE3 409 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Usp1Q8BJQ2 784 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Eif2aQ8BJW6 581 aaKnown RBP14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nrbp2Q91V36 499 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nme5Q99MH5 211 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Nt5c3aQ9D020 331 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Plscr2Q9DCW2 307 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Trpc2Q9R244 1172 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 HnrnpcQ9Z204 313 aaKnown RBP14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Atrnl1Q6A051 1378 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Gm29554A0A087WNW4 188 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Mroh5E9PUJ8 762 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Apba3O88888 571 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Cyth2P63034 400 aaKnown RBP14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Jdp2P97875 163 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 InhbaQ04998 424 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ppp4r3cQ3V0Y1 813 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Map3k7Q62073 579 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Znf365Q8BG89 408 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Clec4gQ8BNX1 294 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Rbbp5Q8BX09 538 aaKnown RBP14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Txndc12Q9CQU0 170 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tk2Q9R088 270 aa14.03□□□□□ -0.16
Nup88-201ENSMUST00000035283 Ambra1A2AH22 1300 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Fam171a2A2A699 822 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zfp651E9PZ11 729 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 AunipE9Q6Z5 340 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Bmpr2O35607 1038 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Axin1O35625 863 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tspyl1O88852 379 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Eif3eP60229 445 aaKnown RBP14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Kmt5aQ2YDW7 349 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Elf3Q3UPW2 391 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Grid2Q61625 1007 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Syn2Q64332 586 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Capn11Q6J756 714 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Zfyve28Q6ZPK7 905 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Znf579Q80VM4 562 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Tmem74Q8BQU7 305 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 GlmnQ8BZM1 596 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Hdac7Q8C2B3 938 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Pex19Q8VCI5 299 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Spats2lQ91WJ7 558 aaKnown RBP14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 TfQ921I1 697 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Kdelr1Q99JH8 212 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Emc2Q9CRD2 297 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 MceeQ9D1I5 178 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Dtwd1Q9D8U7 304 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Krt27Q9Z320 448 aa14.02□□□□□ -0.16
Nup88-201ENSMUST00000035283 Btaf1E9QAE3 1848 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Gm11549A0A286YD83 63 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup10A2BIN1 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup14A2CEK7 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup19A9C497 187 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup15A9R9W0 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup17B5X0G2 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Smok3aC0HKC8 504 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Smok3bC0HKC9 504 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup8E9PVW0 235 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup7E9QA79 235 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 C130060K24RikG3UWA8 416 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup6P02762 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup1P11588 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Mup2P11589 180 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Rnf216P58283 853 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Smyd1P97443 490 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 OtulinQ3UCV8 352 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pim2Q62070 370 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Srd5a1Q68FF9 255 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 N4bp1Q6A037 893 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Znf507Q6ZPY5 941 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Slc7a14Q8BXR1 771 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 TgdsQ8VDR7 355 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 DaglbQ91WC9 669 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Pomgnt1Q91X88 660 aa14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 AenQ9CZI9 336 aaKnown RBP14.02□□□□□ -0.17
Nup88-201ENSMUST00000035283 Ttc33Q9D6K7 262 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms