RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 4931408C20RikE9PWP9 1381 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 RarbP22605 482 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 VcpQ01853 806 aaKnown RBP17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tp53i13Q5F267 385 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ntrk3Q6VNS1 825 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tas2r109Q7M707 316 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Pi4kbQ8BKC8 816 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Elmo3Q8BYZ7 720 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm5114W4VSN8 858 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Scgb2b11A0A087WR49 112 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 AspgA0JNU3 564 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Srp72F8VQC1 671 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gnat1P20612 350 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sult1e1P49891 295 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cyp2c39P56656 490 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ndufaf2Q59J78 168 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Atp4aQ64436 1033 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Epha10Q8BYG9 1007 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Slc9b1Q8C0X2 565 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Grk2Q99MK8 689 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cep72Q9D3R3 646 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Limd1Q9QXD8 668 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rims2Q9EQZ7 1530 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Map7d3A2AEY4 876 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Hsd17b1P51656 344 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Flot2Q60634 428 aaKnown RBP17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Lsm8Q6ZWM4 96 aaKnown RBP17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ppm1nQ8BGL1 404 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Olfml3Q8BK62 406 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 3830417A13RikQ8BQJ2 303 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rps6kl1Q8R2S1 544 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ttc30a1Q99J38 664 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rassf3Q99P51 232 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Foxm1O08696 760 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sar1aP36536 198 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Wbp4Q61048 376 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Thap3Q8BJ25 218 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Kank2Q8BX02 843 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Bco2Q99NF1 532 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Mrpl57Q9CQF8 102 aaKnown RBP17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Znf654Q9DAU9 571 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ndufa13Q9ERS2 144 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ap3d1O54774 1199 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 B3gat3P58158 335 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tdrd7Q8K1H1 1086 aaKnown RBP17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ing3Q8VEK6 421 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Txndc5Q91W90 417 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Q9D1F3 157 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 PudpQ9D5U5 234 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sgf29Q9DA08 293 aaKnown RBP17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Parp14Q2EMV9 1817 aa17.23■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm15448F6PZL4 682 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 NfiaQ02780 532 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm11437Q5QR91 290 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Myl6Q60605 151 aaKnown RBP17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm5414Q6IFZ8 552 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Spata20Q80YT5 790 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Pomgnt2Q8BW41 605 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cwf19l1Q8CI33 537 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Polr3hQ9D2C6 204 aaKnown RBP17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rabl3Q9D4V7 236 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Atp5oQ9DB20 213 aaKnown RBP17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ddx20Q9JJY4 825 aaKnown RBP17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Trim10Q9WUH5 489 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Bpifb9bA2AJD1 591 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Itga9B8JK39 1036 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Fam172aQ3TNH5 417 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Pitpnm3Q3UHE1 974 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 WhammQ571B6 793 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Olfr698Q7TRN4 311 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Bpifb9aQ80XI7 591 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ascc1Q9D8Z1 356 aaKnown RBP17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm21964A0A1W2P7S4 437 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sat1P48026 171 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 E2f7Q6S7F2 904 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Olfr212Q7TS33 327 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Camta2Q80Y50 1208 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Brat1Q8C3R1 822 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Glra3Q91XP5 464 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gid8Q9D7M1 228 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ngly1Q9JI78 651 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm7086A0A1W2P766 342 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 PtenO08586 403 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Man1a1P45700 655 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 BegainQ68EF6 600 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gtf3c4Q8BMQ2 817 aaKnown RBP17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Slc44a2Q8BY89 706 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Dedd2Q8QZV0 330 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Slf1Q8R3P9 1054 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gpr63Q9EQQ3 425 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cd97Q9Z0M6 818 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Kcnd2Q9Z0V2 630 aa17.22■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cps1Q8C196 1500 aa17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 PfasQ5SUR0 1337 aa17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cdh2P15116 906 aa17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Kcna3P16390 528 aa17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 CttnQ60598 546 aaKnown RBP17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Borcs6Q9D6W8 360 aa17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tbx20Q9ES03 445 aa17.21■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Olig1Q9JKN5 260 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms