RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Clrn2B2RVW2 232 aa14.45□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ankrd23Q812A3 306 aa14.45□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mrpl1Q99N96 336 aaKnown RBP14.45□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tdrd12Q9CWU0 1215 aa14.45□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cyp3a44Q9EQW4 504 aa14.45□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Oip5A2AQ14 241 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gm17333C6EQI3 125 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 OmdO35103 423 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 UmpsP13439 481 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Traf3Q60803 567 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Wnk4Q80UE6 1222 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Baiap2l2Q80Y61 522 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Q8BGD0 127 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Fam192aQ91WE2 254 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 AurkcO88445 282 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 CraddO88843 199 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Psmc5P62196 406 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ripor1Q68FE6 1223 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Oas1dQ8VI95 361 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Rsl24d1Q99L28 163 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Noxred1Q9D3S5 366 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ndufs3Q9DCT2 263 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Myo5cE9Q1F5 1742 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Syndig1A2ANU3 258 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Clec4fP70194 548 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gpr162Q3UN16 588 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Trim67Q505D9 768 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Hist2h2acQ64523 129 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Hist2h2aa1Q6GSS7 130 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Acot5Q6Q2Z6 421 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Osbpl2Q8BX94 484 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Hspa12bQ9CZJ2 685 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Hs6st1Q9QYK5 411 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Vav3Q9R0C8 847 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Atp6v1c1Q9Z1G3 382 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Dennd5bA2RSQ0 1274 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 YwhazP63101 245 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 E2f7Q6S7F2 904 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 GzmnQ920S1 248 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ndufaf1Q9CWX2 328 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ddx47Q9CWX9 455 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Rasgrp2Q9QUG9 608 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cd19P25918 547 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Itga1Q3V3R4 1179 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Adck2Q6NSR3 617 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 GskipQ8BGR8 139 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gper1Q8BMP4 375 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 RorbQ8R1B8 470 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cdc16Q8R349 620 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Fam20bQ8VCS3 409 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Aim2Q91VJ1 354 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Zbtb1Q91VL9 713 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mup6A2AV72 179 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Mapkapk2P49138 386 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cdca2Q14B71 982 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gpd1lQ3ULJ0 351 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Atg16l2Q6KAU8 623 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gemin4Q6P6L6 1058 aaKnown RBP14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Haus7Q8BKT8 364 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ten1Q9D7K2 161 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ehd3Q9QXY6 535 aa14.44□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Efna5O08543 228 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ap2a2P17427 938 aaKnown RBP14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Trim50Q810I2 483 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Exo5Q9CXP9 373 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gm8011K7N6Y5 207 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Epb41l4aP52963 686 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Fbxo39Q5NBU5 443 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 TnrQ8BYI9 1358 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 AgpsQ8C0I1 645 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Fuca2Q99KR8 461 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Dync1li2Q6PDL0 492 aaKnown RBP14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pcmtd2Q8BHD8 359 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cdc73Q8JZM7 531 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Wdsub1Q9D0I6 474 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Akap1O08715 857 aaKnown RBP14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pold1P52431 1105 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Btbd3P58545 530 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Brsk2Q69Z98 735 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 LdhdQ7TNG8 484 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Inpp5bQ8K337 993 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Scrn1Q9CZC8 414 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Sh3glb1Q9JK48 365 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Herc3A6H6S0 1050 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tsc22d2E9Q7M2 769 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 BtkP35991 659 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Phactr1Q2M3X8 580 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 C1orf109Q499E6 217 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 PhgdhQ61753 533 aaKnown RBP14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Tdpoz3Q717B4 365 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Olfr1494Q8VGP8 315 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Nmrk1Q91W63 195 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Terb2Q9D494 218 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Cdh18E9Q9Q6 790 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Akt1P31750 480 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Pim2Q62070 370 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Nqo1Q64669 274 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Ppp1r3aQ99MR9 1089 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Klra10Q9R1G6 266 aa14.43□□□□□ -0.1
Col5a1-201ENSMUST00000028280 Gm5814J3QP80 125 aa14.43□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms