RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 S100a6P14069 89 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gsta3P30115 221 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Scd4Q6T707 353 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tmc8Q7TN58 722 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Znf879Q8BI99 563 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Lin7aQ8JZS0 233 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mtmr9Q9Z2D0 545 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 SynrgQ5SV85 1306 aa11.24□□□□□ -0.61
Ciita-201ENSMUST00000023147 C87977A2A958 498 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Trmt1lA2RSY6 728 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Anxa8O35640 327 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Akap10O88845 662 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 TxnP10639 105 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 FechP22315 420 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sox6P40645 827 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mark2Q05512 776 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cyp2c67Q569X9 491 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 HrQ61645 1182 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Wnk4Q80UE6 1222 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Iars2Q8BIJ6 1012 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Taf2Q8C176 1104 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 A430089I19RikQ8C9W1 407 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Terb2Q9D494 218 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 PlekQ9JHK5 350 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Aldh1a3Q9JHW9 512 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Phtf1Q9QZ09 761 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Atp6v1g2Q9WTT4 118 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dlg5E9Q9R9 1921 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Map7d3A2AEY4 876 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Oip5A2AQ14 241 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ces1cP23953 554 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sstr3P30935 428 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tlx1P43345 332 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dna2Q6ZQJ5 1062 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Elac2Q80Y81 831 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Snx17Q8BVL3 470 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Btbd9Q8C726 612 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rmnd1Q8CI78 450 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ccdc137Q8R0K4 290 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Fam205aA2APU8 1308 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gm13023A2A8N2 498 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pramef20B1ARV6 477 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Zcchc7B1AX39 541 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 A430078G23RikE9Q7Y4 484 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 FynP39688 537 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 SftpdP50404 374 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Eps8Q08509 821 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rpusd2Q149F1 553 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ccdc51Q3URS9 406 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Llgl1Q80Y17 1036 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Setdb2Q8C267 713 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ccdc130Q9D516 385 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Trim10Q9WUH5 489 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Wdr49A0A0N4SUK7 710 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nme9A0A1L1SUL6 329 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gm8298J3QPI0 401 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ppef2O35385 757 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Vti1bO88384 232 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 McuQ3UMR5 350 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Prkaa1Q5EG47 559 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Xlr3aQ60595 226 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tbc1d12Q6A039 696 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cand2Q6ZQ73 1235 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ush1gQ80T11 461 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kdm4bQ91VY5 1086 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Traf7Q922B6 594 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 NgrnQ99KS2 293 aaKnown RBP11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mtfr1lQ9CWE0 289 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Asah2Q9JHE3 756 aa11.23□□□□□ -0.61
Ciita-201ENSMUST00000023147 Skint11A7XV14 364 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Apoa4P06728 395 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cdc25cP48967 447 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 SpoplQ2M2N2 392 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Syce1lQ5D525 247 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kcna5Q61762 602 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nup93Q8BJ71 819 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ildr1Q8CBR1 537 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Btbd7Q8CFE5 1130 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Gpsm2Q8VDU0 679 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Usp29Q9ES63 869 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Acot3Q9QYR7 432 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Scgb2b21A0A087WQA9 112 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sec22bO08547 215 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rtn2O70622 471 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ap2a2P17427 938 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Irf8P23611 424 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mgat1P27808 447 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sat1P48026 171 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Psmc5P62196 406 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pcsk1P63239 753 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Serpina5P70458 405 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Coq7P97478 217 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Stip1Q60864 543 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Elmo2Q8BHL5 732 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 HyiQ8R1F5 277 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nmrk1Q91W63 195 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Lrrc57Q9D1G5 239 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cyp39a1Q9JKJ9 470 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Cdc42ep4Q9JM96 349 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rnf103Q9R1W3 683 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms