RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Znf467Q8JZL0 594 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Ppp1r16bQ8VHQ3 568 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Tas1r3Q925D8 858 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Slc25a11Q9CR62 314 aaKnown RBP17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Ddx56Q9D0R4 546 aaKnown RBP17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Kat2aQ9JHD2 830 aa17.18■□□□□ 0.34
Shh-201ENSMUST00000002708 Speer4f2E9Q366 295 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Ndufs6P52503 116 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Kpnb1P70168 876 aaKnown RBP17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Cdh8P97291 799 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Slc9b2Q5BKR2 547 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 AmphQ7TQF7 686 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Cpsf7Q8BTV2 471 aaKnown RBP17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Adgrg2Q8CJ12 1009 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 DolkQ8R2Y3 534 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Tekt2Q922G7 430 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 1700129C05RikQ9CQ77 218 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mxra7Q9CZH7 178 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 ParvaQ9EPC1 372 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Cpsf3Q9QXK7 684 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Usp21Q9QZL6 566 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Ggps1Q9WTN0 300 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Fndc3c1Q6DFV6 1356 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 B020011L13RikA0A087WQI7 412 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup10A2BIN1 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup14A2CEK7 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup19A9C497 187 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup15A9R9W0 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup17B5X0G2 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup8E9PVW0 235 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup7E9QA79 235 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Efna5O08543 228 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Cops5O35864 334 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup6P02762 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Hoxc6P10629 235 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup1P11588 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mup2P11589 180 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Ptk2P34152 1090 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Foxp2P58463 714 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Arl14Q3SXC5 192 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Mylk3Q3UIZ8 795 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Gpr151Q7TSN6 422 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Moxd2Q7TT41 619 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Tmco6Q8BQX5 494 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 N4bp3Q8C7U1 537 aa17.17■□□□□ 0.34
Shh-201ENSMUST00000002708 Scn10aQ6QIY3 1958 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm3460E9QAI8 215 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Tspyl1O88852 379 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Krt13P08730 437 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Rpl22P67984 128 aaKnown RBP17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Zscan2Q07230 614 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Mks1Q5SW45 561 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Soat1Q61263 540 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Fam214aQ69ZK7 1075 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 NfascQ810U3 1240 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Cog3Q8CI04 820 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Ablim1Q8K4G5 861 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Nsmce3Q9CPR8 279 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Toe1Q9D2E2 511 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Plod3Q9R0E1 741 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Cyp2c69E9PXC3 491 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 D830030K20RikE9PYQ5 218 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 PtproE9Q612 1226 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Dcdc2bF7BCK0 340 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm3043K7N693 218 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm16440K7N6G6 218 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm2244L7N2A3 218 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm3278L7N2D2 218 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm8271L7N2E2 218 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Axin1O35625 863 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Ppargc1aO70343 797 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Rasgrf1P27671 1262 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Fbln2P37889 1221 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Cyp2c40P56657 491 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Ubn1Q4G0F8 1135 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Spa17Q62252 149 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 HpseQ6YGZ1 535 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Znf12Q7TSI0 686 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Prpf38bQ80SY5 542 aaKnown RBP17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Syt15Q8C6N3 418 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Lamtor4Q8CF66 99 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gtpbp10Q8K013 366 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Ccr10Q9JL21 362 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Diaph3Q9Z207 1171 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Crlf3Q9Z2L7 442 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Tatdn2B7ZNL9 783 aaKnown RBP17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Zfp715G3X9T1 886 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Ift81O35594 676 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Anxa8O35640 327 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Il3P01586 166 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gnl1P36916 607 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Npas2P97460 816 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 9130409I23RikQ3TS87 320 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm14685Q52KH6 695 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Mea1Q64327 174 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Cacna2d2Q6PHS9 1154 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Mical2Q8BML1 960 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Fam151aQ8QZW3 608 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Lpin3Q99PI4 848 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Polr3cQ9D483 533 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms