RNA–Protein interactions for RNA: tC(GCA)P1

tC(GCA)P1, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)P1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)P1tC(GCA)P1 RPL24BP24000 155 aaKnown RBP1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 HMX1P32339 317 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 DER1P38307 211 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 SUR2P38992 349 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YIL163CP40448 117 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YIF1P53845 314 aaKnown RBP1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 ORM2Q06144 216 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YOR385WQ08909 290 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 UTP23Q12339 254 aaKnown RBP1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 RDI1Q12434 202 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 MED11Q99278 115 aa1.69□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 RPL31BP0C2H9 113 aaKnown RBP1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 MRPL20P22354 195 aaPredicted RBP1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 RIB5P38145 238 aa1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 TEM1P38987 245 aa1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 RPC10P40422 70 aa1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 GTF1P53260 183 aaPredicted RBP1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 MRX11Q03079 207 aa1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 ATX2Q12067 313 aa1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 KSH1Q8TGJ3 72 aa1.68□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 CDC50P25656 391 aa1.67□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YHR173CP38864 112 aa1.67□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 CWP2P43497 92 aa1.67□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 PCC1Q3E833 88 aa1.67□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 MRS1P07266 363 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 HSP12P22943 109 aaKnown RBP1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YBL059WP34224 193 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 MRPS9P38120 278 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 HPA3P39979 161 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 LSM1P47017 172 aaKnown RBP1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 AIM25P47140 327 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YJR146WP47174 117 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 YGL088WP53151 121 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 DAD4P69851 72 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 TIM22Q12328 207 aa1.66□□□□□ -2.14
tC(GCA)P1tC(GCA)P1 POF1P25576 258 aa1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 RPL13BP40212 199 aaKnown RBP1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 OST3P48439 350 aa1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SMX3P54999 86 aaPredicted RBP1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YDL242WQ07746 117 aa1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 RPL13AQ12690 199 aaPredicted RBP1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 HTZ1Q12692 134 aaKnown RBP1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SUS1Q6WNK7 96 aa1.65□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 ADH3P07246 375 aaKnown RBP1.64□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YBR209WP38311 105 aa1.64□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YER085CP40058 173 aa1.64□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SNU23Q12368 194 aaPredicted RBP1.64□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YGL041C-BQ3E750 60 aa1.64□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SAR1P20606 190 aaKnown RBP1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 MRP49P32388 137 aa1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SLM6P38343 150 aa1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 VTC1P40046 129 aaRIP-Chip data1.63□□□□□ -2.15not detected
tC(GCA)P1tC(GCA)P1 AVO2Q04749 426 aa1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 TY1A-GR1Q12085 440 aa1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 DAD1Q12248 94 aa1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YLR342W-AQ3E810 57 aa1.63□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YCR016WP25617 290 aaKnown RBP1.62□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 GPI15P53961 229 aa1.62□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YMR082CQ04276 118 aa1.62□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YHR213W-AQ8TGT4 77 aa1.62□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 AQY1P0CD91 305 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 MSK1P32048 576 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YBR219CP38317 127 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SEC72P39742 193 aaKnown RBP1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 EDC2P40023 145 aaPredicted RBP1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 LOC1P43586 204 aaPredicted RBP1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 GLO1P50107 326 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 TIM44Q01852 431 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 ATC1Q04005 294 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YAL063C-AQ3E791 96 aa1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 TFB5Q3E7C1 72 aaPredicted RBP1.61□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 KRE1P17260 313 aa1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 TIP1P27654 210 aaPredicted RBP1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 GPX2P38143 162 aa1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 AME1P38313 324 aa1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YEA6P39953 335 aa1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 RPS29BP41058 56 aaKnown RBP1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 ENV10Q99382 181 aa1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 Q0032Q9ZZX7 96 aa1.6□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 ADH1P00330 348 aaKnown RBP1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YCR043CP25361 127 aa1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 SCM4P32564 187 aa1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 DCV1P43595 202 aa1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YFR045WP43617 309 aa1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 COX16P47081 118 aa1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YJR085CP47131 105 aaKnown RBP1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 RBL2P48606 106 aaKnown RBP1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 VMA10P48836 114 aaKnown RBP1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YGL193CP53097 103 aa1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 PNC1P53184 216 aaKnown RBP1.59□□□□□ -2.15
tC(GCA)P1tC(GCA)P1 YEL045CP32616 141 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 FZF1P32805 299 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 RPS0AP32905 252 aaKnown RBP1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 KNH1P50112 268 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 PHO23P50947 330 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 MRPL50P53724 139 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 YLR118CQ12354 227 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 YLR146W-AQ2V2P1 62 aa1.58□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 MRPL31P14063 131 aaPredicted RBP1.57□□□□□ -2.16
tC(GCA)P1tC(GCA)P1 PCL2P25693 308 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 359.5 ms