RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W HRT1Q08273 121 aa1.73□□□□□ -2.13
SNU114YKL173W YOR268CQ08734 132 aa1.73□□□□□ -2.13
SNU114YKL173W RPL13AQ12690 199 aaPredicted RBP1.73□□□□□ -2.13
SNU114YKL173W UBC5P15732 148 aa1.73□□□□□ -2.13
SNU114YKL173W ATP15P21306 62 aa1.73□□□□□ -2.13
SNU114YKL173W YCR050CP25630 102 aa1.73□□□□□ -2.13
SNU114YKL173W AHT1P29589 182 aa1.73□□□□□ -2.13
SNU114YKL173W NSG1P38837 291 aa1.73□□□□□ -2.13
SNU114YKL173W VTC1P40046 129 aaRIP-Chip data1.73□□□□□ -2.13not detected
SNU114YKL173W PHS1P40857 217 aa1.73□□□□□ -2.13
SNU114YKL173W HAL1Q01766 294 aa1.73□□□□□ -2.13
SNU114YKL173W SEN15Q04675 128 aa1.73□□□□□ -2.13
SNU114YKL173W ANT1Q06497 328 aa1.73□□□□□ -2.13
SNU114YKL173W GPI11Q06636 219 aa1.73□□□□□ -2.13
SNU114YKL173W TEL1P38110 2787 aa1.73□□□□□ -2.13
SNU114YKL173W MRPL44P19956 98 aa1.72□□□□□ -2.13
SNU114YKL173W MAK31P23059 88 aa1.72□□□□□ -2.13
SNU114YKL173W SDH4P37298 181 aa1.72□□□□□ -2.13
SNU114YKL173W GNA1P43577 159 aaPredicted RBP1.72□□□□□ -2.13
SNU114YKL173W ERG25P53045 309 aa1.72□□□□□ -2.13
SNU114YKL173W UPS1Q05776 175 aa1.72□□□□□ -2.13
SNU114YKL173W MED11Q99278 115 aa1.72□□□□□ -2.13
SNU114YKL173W HTL1Q9URQ5 78 aa1.72□□□□□ -2.13
SNU114YKL173W HMRA1P0CY11 126 aa1.72□□□□□ -2.13
SNU114YKL173W EMP24P32803 203 aaKnown RBP1.72□□□□□ -2.13
SNU114YKL173W MRPL11P36521 249 aaPredicted RBP1.72□□□□□ -2.13
SNU114YKL173W YER135CP40082 130 aa1.72□□□□□ -2.13
SNU114YKL173W DOC1P53068 250 aa1.72□□□□□ -2.13
SNU114YKL173W GAS3Q03655 524 aa1.72□□□□□ -2.13
SNU114YKL173W MSW1P04803 379 aa1.72□□□□□ -2.13
SNU114YKL173W SRB6P32570 121 aa1.72□□□□□ -2.13
SNU114YKL173W YAL064WP39711 94 aa1.72□□□□□ -2.13
SNU114YKL173W YGR026WP53217 278 aa1.72□□□□□ -2.13
SNU114YKL173W SLD7Q08457 257 aa1.72□□□□□ -2.13
SNU114YKL173W YGL010WP25338 174 aa1.71□□□□□ -2.14
SNU114YKL173W TMA19P35691 167 aaKnown RBP1.71□□□□□ -2.14
SNU114YKL173W YER084WP40057 128 aa1.71□□□□□ -2.14
SNU114YKL173W FIS1P40515 155 aa1.71□□□□□ -2.14
SNU114YKL173W YPL067CQ02754 198 aa1.71□□□□□ -2.14
SNU114YKL173W SWC7Q06707 132 aa1.71□□□□□ -2.14
SNU114YKL173W YDR029WQ12111 104 aa1.71□□□□□ -2.14
SNU114YKL173W ISD11Q6Q560 94 aa1.71□□□□□ -2.14
SNU114YKL173W FAS1P07149 2051 aaKnown RBP1.71□□□□□ -2.14
SNU114YKL173W PRP8P33334 2413 aaKnown RBP1.71□□□□□ -2.14
SNU114YKL173W RPL9AP05738 191 aaKnown RBP1.71□□□□□ -2.14
SNU114YKL173W RAD10P06838 210 aa1.71□□□□□ -2.14
SNU114YKL173W HTD2P38790 280 aaKnown RBP1.71□□□□□ -2.14
SNU114YKL173W YIR035CP40579 254 aa1.71□□□□□ -2.14
SNU114YKL173W PIR5P46999 287 aa1.71□□□□□ -2.14
SNU114YKL173W RPL9BP51401 191 aaKnown RBP1.71□□□□□ -2.14
SNU114YKL173W EST3Q03096 181 aa1.71□□□□□ -2.14
SNU114YKL173W SHH3Q04487 196 aa1.71□□□□□ -2.14
SNU114YKL173W YLR156WP0CE96 114 aa1.7□□□□□ -2.14
SNU114YKL173W YLR159WP0CE97 114 aa1.7□□□□□ -2.14
SNU114YKL173W YLR161WP0CE98 114 aa1.7□□□□□ -2.14
SNU114YKL173W INO4P13902 151 aa1.7□□□□□ -2.14
SNU114YKL173W BET1P22804 142 aa1.7□□□□□ -2.14
SNU114YKL173W GAT4P40569 121 aa1.7□□□□□ -2.14
SNU114YKL173W ERV14P53173 138 aa1.7□□□□□ -2.14
SNU114YKL173W RCE1Q03530 315 aa1.7□□□□□ -2.14
SNU114YKL173W FYV12Q08559 129 aa1.7□□□□□ -2.14
SNU114YKL173W YPR063CQ12160 140 aa1.7□□□□□ -2.14
SNU114YKL173W YOR097CQ12274 175 aaPredicted RBP1.7□□□□□ -2.14
SNU114YKL173W YOR020W-AQ3E824 90 aa1.7□□□□□ -2.14
SNU114YKL173W YOS1Q3E834 85 aa1.7□□□□□ -2.14
SNU114YKL173W DUR1,2P32528 1835 aaKnown RBP1.7□□□□□ -2.14
SNU114YKL173W COX5BP00425 151 aa1.7□□□□□ -2.14
SNU114YKL173W FMT1P32785 401 aa1.7□□□□□ -2.14
SNU114YKL173W PAM17P36147 197 aa1.7□□□□□ -2.14
SNU114YKL173W YHL042WP38729 150 aa1.7□□□□□ -2.14
SNU114YKL173W YEL028WP39989 153 aa1.7□□□□□ -2.14
SNU114YKL173W SPO73P40031 143 aa1.7□□□□□ -2.14
SNU114YKL173W RPL13BP40212 199 aaKnown RBP1.7□□□□□ -2.14
SNU114YKL173W EMC4P53073 190 aa1.7□□□□□ -2.14
SNU114YKL173W SPG3Q04398 127 aaPredicted RBP1.7□□□□□ -2.14
SNU114YKL173W KEI1Q06346 221 aa1.7□□□□□ -2.14
SNU114YKL173W ATP20Q12233 115 aa1.7□□□□□ -2.14
SNU114YKL173W YML100W-AQ8TGT0 57 aa1.7□□□□□ -2.14
SNU114YKL173W CLB6P32943 380 aa1.69□□□□□ -2.14
SNU114YKL173W NSA2P40078 261 aaKnown RBP1.69□□□□□ -2.14
SNU114YKL173W CWP2P43497 92 aa1.69□□□□□ -2.14
SNU114YKL173W FIT3Q08907 204 aa1.69□□□□□ -2.14
SNU114YKL173W UTP20P35194 2493 aaKnown RBP1.69□□□□□ -2.14
SNU114YKL173W YAR023CD6VPM8 179 aa1.69□□□□□ -2.14
SNU114YKL173W RPS19AP07280 144 aaKnown RBP1.69□□□□□ -2.14
SNU114YKL173W RPS19BP07281 144 aaPredicted RBP1.69□□□□□ -2.14
SNU114YKL173W YPR170W-BP0C5R9 85 aa1.69□□□□□ -2.14
SNU114YKL173W URA5P13298 226 aaKnown RBP1.69□□□□□ -2.14
SNU114YKL173W SFT2P38166 215 aa1.69□□□□□ -2.14
SNU114YKL173W SNF11P38956 169 aa1.69□□□□□ -2.14
SNU114YKL173W YOL014WQ08110 124 aa1.69□□□□□ -2.14
SNU114YKL173W RPS23AP0CX29 145 aaKnown RBP1.69□□□□□ -2.14
SNU114YKL173W RPS23BP0CX30 145 aa1.69□□□□□ -2.14
SNU114YKL173W IPT1P38954 527 aa1.69□□□□□ -2.14
SNU114YKL173W UPS3Q04006 179 aa1.69□□□□□ -2.14
SNU114YKL173W SYM1Q06563 197 aa1.69□□□□□ -2.14
SNU114YKL173W RRT7Q07829 113 aa1.69□□□□□ -2.14
SNU114YKL173W FEX1Q08913 375 aa1.69□□□□□ -2.14
SNU114YKL173W SCS22Q6Q595 175 aa1.69□□□□□ -2.14
SNU114YKL173W MDH2P22133 377 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms