RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	KSH1	Q8TGJ3	72 aa		2.38	□□□□□ -2.03
CCM1	YGR150C	UBC4	P15731	148 aa		2.38	□□□□□ -2.03
CCM1	YGR150C	YFL012W	P43580	148 aa		2.38	□□□□□ -2.03
CCM1	YGR150C	LYS2	P07702	1392 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	ECM31	P38122	312 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	SPO73	P40031	143 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	RAD28	Q12021	506 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	MIC10	Q96VH5	97 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	FAS1	P07149	2051 aa	Known RBP	2.37	□□□□□ -2.03
CCM1	YGR150C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
CCM1	YGR150C	YGR269W	P40326	108 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	YGL260W	P53056	76 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	GPI19	Q04082	140 aa		2.37	□□□□□ -2.03
CCM1	YGR150C	NMA1	Q06178	401 aa	Known RBP	2.37	□□□□□ -2.03
CCM1	YGR150C	MSB2	P32334	1306 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	FIT3	Q08907	204 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	YDR029W	Q12111	104 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	MRPL44	P19956	98 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	GTT1	P40582	234 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	YPR195C	Q06594	109 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	BNI1	P41832	1953 aa		2.36	□□□□□ -2.03
CCM1	YGR150C	YER084W	P40057	128 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	CIS3	P47001	227 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	CUE4	Q04201	117 aa	Predicted RBP	2.35	□□□□□ -2.03
CCM1	YGR150C	YOS1	Q3E834	85 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	COA6	Q3E846	104 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	ESC1	Q03661	1658 aa	Known RBP	2.35	□□□□□ -2.03
CCM1	YGR150C	HMRA1	P0CY11	126 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	YBR209W	P38311	105 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	IPT1	P38954	527 aa		2.35	□□□□□ -2.03
CCM1	YGR150C	RPL13B	P40212	199 aa	Known RBP	2.35	□□□□□ -2.03
CCM1	YGR150C	PDR10	P51533	1564 aa		2.34	□□□□□ -2.03
CCM1	YGR150C	YEL045C	P32616	141 aa		2.34	□□□□□ -2.03
CCM1	YGR150C	MRPL11	P36521	249 aa	Predicted RBP	2.34	□□□□□ -2.03
CCM1	YGR150C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.34	□□□□□ -2.03
CCM1	YGR150C	NUM1	Q00402	2748 aa		2.34	□□□□□ -2.04
CCM1	YGR150C	RPL26A	P05743	127 aa	Known RBP	2.34	□□□□□ -2.04
CCM1	YGR150C	PAU21	P0CE86	164 aa		2.34	□□□□□ -2.04
CCM1	YGR150C	PAU22	P0CE87	164 aa		2.34	□□□□□ -2.04
CCM1	YGR150C	RPL26B	P53221	127 aa	Known RBP	2.34	□□□□□ -2.04
CCM1	YGR150C	DAD4	P69851	72 aa		2.34	□□□□□ -2.04
CCM1	YGR150C	TMC1	Q08422	150 aa	Predicted RBP	2.34	□□□□□ -2.04
CCM1	YGR150C	SEC11	P15367	167 aa		2.33	□□□□□ -2.04
CCM1	YGR150C	HSP10	P38910	106 aa		2.33	□□□□□ -2.04
CCM1	YGR150C	MSL1	P40567	111 aa	Predicted RBP	2.33	□□□□□ -2.04
CCM1	YGR150C	MET5	P47169	1442 aa		2.33	□□□□□ -2.04
CCM1	YGR150C	YHL018W	P38744	120 aa	Predicted RBP	2.33	□□□□□ -2.04
CCM1	YGR150C	YMR082C	Q04276	118 aa		2.33	□□□□□ -2.04
CCM1	YGR150C	YSP2	Q06681	1438 aa		2.33	□□□□□ -2.04
CCM1	YGR150C	TY1B-PR2	P0C2J0	1756 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	SRB6	P32570	121 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	UTH1	P36135	365 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	YER187W	P40102	141 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	PEP8	P40335	379 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	EMC5	P40540	141 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	YGL149W	P53116	101 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	SEN15	Q04675	128 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	NAT5	Q08689	176 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	COX8	P04039	78 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	HPA3	P39979	161 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	DCV1	P43595	202 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	HUR1	P45820	110 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	IGO1	P53897	168 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	ELP6	Q04868	273 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	YPR153W	Q06537	140 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	YDL157C	Q12082	118 aa		2.32	□□□□□ -2.04
CCM1	YGR150C	YDR114C	Q04597	100 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	HRT1	Q08273	121 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	YPL261C	Q08976	102 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	ECM12	O13529	151 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	RPL40A	P0CH08	128 aa	Known RBP	2.31	□□□□□ -2.04
CCM1	YGR150C	RPL40B	P0CH09	128 aa	Known RBP	2.31	□□□□□ -2.04
CCM1	YGR150C	MRPS9	P38120	278 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	BRP1	P53194	125 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	PAU12	P53343	120 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	POP3	P53833	195 aa	Predicted RBP	2.31	□□□□□ -2.04
CCM1	YGR150C	MIX14	Q04341	121 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	GPI11	Q06636	219 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	DAD1	Q12248	94 aa		2.31	□□□□□ -2.04
CCM1	YGR150C	STF2	P16965	84 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	VMA21	P41806	77 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	YJR146W	P47174	117 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	YLR296W	Q05898	108 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	VPS68	Q12016	184 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	MDM35	O60200	86 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	RPS25B	P0C0T4	108 aa	Known RBP	2.3	□□□□□ -2.04
CCM1	YGR150C	FUN14	P18411	198 aa		2.3	□□□□□ -2.04
CCM1	YGR150C	RPS25A	Q3E792	108 aa	Predicted RBP	2.3	□□□□□ -2.04
CCM1	YGR150C	UTR5	P32630	166 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	SVP26	P38869	228 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	YFL051C	P43552	160 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	RSM19	P53733	91 aa	Predicted RBP	2.29	□□□□□ -2.04
CCM1	YGR150C	FIT2	Q08906	153 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	YMR030W-A	Q3E760	96 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	CMC4	Q3E7A9	73 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	PAU2	P32612	120 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	YPL067C	Q02754	198 aa		2.29	□□□□□ -2.04
CCM1	YGR150C	FMT1	P32785	401 aa		2.28	□□□□□ -2.04
CCM1	YGR150C	RRT15	Q3E811	62 aa		2.28	□□□□□ -2.04
CCM1	YGR150C	KRE1	P17260	313 aa		2.28	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms